HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:8.8 nTPM
HPA Brain:25.4 nTPM
GTEx:8.8 nTPM
FANTOM5:50.4 Scaled Tags Per Million
Pig:21.3 nTPM
Mouse:40.3 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030464
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 25.4
Sample id Sample description nTPM
Hippocampus
nTPM: 24.7
2148 Female, age 91, left hemisphere 27.8
1855 Male, age 76, left hemisphere 27.7
1898 Male, age 80, left hemisphere 27.3
2621 Female, age 67, right hemisphere 26.0
1911 Female, age 85, right hemisphere 20.7
2529 Female, age 94, left hemisphere 18.9
Dentate gyrus
nTPM: 25.1
2531 Female, age 67, both hemispheres 26.6
2530 Female, age 94, left hemisphere 26.4
1927 Female, age 91, both hemispheres 25.9
2010 Male, age 76, both hemispheres 25.5
2246 Female, age 85, both hemispheres 24.4
2528 Male, age 74, both hemispheres 22.1
Entorhinal gyrus
nTPM: 22.7
2613 Female, age 94, left hemisphere 25.6
2117 Female, age 91, right hemisphere 24.2
1938 Female, age 85, left hemisphere 22.4
2686 Male, age 75, right hemisphere 21.9
2764 Male, age 80, right hemisphere 21.7
1787 Male, age 76, left hemisphere 20.7
Hippocampus, CA1
nTPM: 25.4
2749 Male, age 80, left hemisphere 30.7
2045 Male, age 76, both hemispheres 26.7
1873 Female, age 85, both hemispheres 25.4
2082 Female, age 91, right hemisphere 24.3
2527 Male, age 74, both hemispheres 20.0
Hippocampus, CA2
nTPM: 22.8
1963 Male, age 80, left hemisphere 29.8
1940 Female, age 85, left hemisphere 22.7
1892 Male, age 76, both hemispheres 22.2
2113 Female, age 91, right hemisphere 22.2
2437 Female, age 94, left hemisphere 21.0
2249 Male, age 74, both hemispheres 19.1
Hippocampus, CA3
nTPM: 24.3
2861 Female, age 67, both hemispheres 30.1
2620 Female, age 94, left hemisphere 29.1
2137 Male, age 80, left hemisphere 24.6
1867 Male, age 76, both hemispheres 22.7
1891 Female, age 85, both hemispheres 20.5
2436 Male, age 74, both hemispheres 18.8
Parahippocampal cortex
nTPM: 19.7
2018 Male, age 76, both hemispheres 23.0
1990 Female, age 91, right hemisphere 20.7
1933 Female, age 85, both hemispheres 20.4
1850 Male, age 80, both hemispheres 20.0
2532 Female, age 72, left hemisphere 20.0
2250 Female, age 67, right hemisphere 19.1
2692 Male, age 74, both hemispheres 18.9
2245 Female, age 91, both hemispheres 18.8
2622 Female, age 67, right hemisphere 18.3
2693 Female, age 94, both hemispheres 17.9
Perirhinal gyrus
nTPM: 18.4
1847 Female, age 91, left hemisphere 20.6
1841 Female, age 85, right hemisphere 19.0
2521 Female, age 94, right hemisphere 18.0
1794 Male, age 80, right hemisphere 17.8
2848 Male, age 76, right hemisphere 16.3
Subiculum
nTPM: 21.6
2729 Female, age 91, right hemisphere 27.0
2042 Male, age 76, both hemispheres 24.4
1901 Male, age 80, both hemispheres 21.2
1977 Female, age 85, both hemispheres 21.0
2619 Male, age 74, both hemispheres 18.4
2438 Female, age 94, left hemisphere 17.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 8.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 8.8
Samples: 197

Max nTPM: 21.5
Min nTPM: 3.9
Std nTPM: 2.7
Median nTPM: 8.4
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 21.5
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 18.0
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 17.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 17.0
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 15.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 15.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 14.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 14.6
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 14.4
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 14.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 14.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.4
FF:10169-103B7 60 years, female 59.1
FF:10153-102I9 76 years, female 41.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 21.3
Pig sample Sample description nTPM
Subiculum
nTPM: 17.6
Samples: 4

Max nTPM: 18.5
Min nTPM: 16.9
Sample A Female 18.5
Sample B Female 16.9
Sample C Male 18.0
Sample D Male 16.9
Dorsal hippocampus
nTPM: 19.4
Samples: 4

Max nTPM: 21.6
Min nTPM: 16.3
Sample A Female 21.6
Sample B Female 19.6
Sample C Male 20.1
Sample D Male 16.3
Entorhinal cortex
nTPM: 16.9
Samples: 4

Max nTPM: 17.7
Min nTPM: 15.3
Sample A Female 17.7
Sample B Female 15.3
Sample C Male 17.6
Sample D Male 16.8
Ventral hippocampus
nTPM: 21.3
Samples: 4

Max nTPM: 28.9
Min nTPM: 15.5
Sample A Female 21.3
Sample B Female 15.5
Sample C Male 28.9
Sample D Male 19.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 40.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.0
Samples: 4

Max nTPM: 23.4
Min nTPM: 17.2
Sample A Male 19.2
Sample B Male 17.2
Sample C Female 23.4
Sample D Female 20.3
Hippocampal formation
nTPM: 40.3
Samples: 4

Max nTPM: 54.7
Min nTPM: 30.9
Sample A Male 30.9
Sample B Male 43.1
Sample C Female 54.7
Sample D Female 32.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
76098390 Antisense, RP_060626_01_G03, Mouse strain C57BL/6J (56 days, male) 6.1

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