HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:58.4 nTPM
HPA Brain:96.8 nTPM
GTEx:58.4 nTPM
FANTOM5:136.4 Scaled Tags Per Million
Pig:70.6 nTPM
Mouse:163.2 nTPM
Allen mouse:1.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000867Antibody CAB004226
Glial cells LowMedium
Neuronal cells HighMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 96.8
Sample id Sample description nTPM
Hippocampus
nTPM: 84.5
1898 Male, age 80, left hemisphere 105.6
2529 Female, age 94, left hemisphere 94.4
2148 Female, age 91, left hemisphere 80.4
1911 Female, age 85, right hemisphere 79.8
1855 Male, age 76, left hemisphere 73.5
2621 Female, age 67, right hemisphere 73.5
Dentate gyrus
nTPM: 82.9
1927 Female, age 91, both hemispheres 94.4
2010 Male, age 76, both hemispheres 91.6
2528 Male, age 74, both hemispheres 90.6
2530 Female, age 94, left hemisphere 81.2
2246 Female, age 85, both hemispheres 75.4
2531 Female, age 67, both hemispheres 64.0
Entorhinal gyrus
nTPM: 76.9
1938 Female, age 85, left hemisphere 103.1
2117 Female, age 91, right hemisphere 86.2
2764 Male, age 80, right hemisphere 85.6
1787 Male, age 76, left hemisphere 73.6
2686 Male, age 75, right hemisphere 59.3
2613 Female, age 94, left hemisphere 53.8
Hippocampus, CA1
nTPM: 96.8
2749 Male, age 80, left hemisphere 141.0
1873 Female, age 85, both hemispheres 94.5
2527 Male, age 74, both hemispheres 88.9
2082 Female, age 91, right hemisphere 84.8
2045 Male, age 76, both hemispheres 74.7
Hippocampus, CA2
nTPM: 93.1
1963 Male, age 80, left hemisphere 114.3
1892 Male, age 76, both hemispheres 105.7
2249 Male, age 74, both hemispheres 105.7
2113 Female, age 91, right hemisphere 80.6
1940 Female, age 85, left hemisphere 80.5
2437 Female, age 94, left hemisphere 71.8
Hippocampus, CA3
nTPM: 86.9
2137 Male, age 80, left hemisphere 115.4
1867 Male, age 76, both hemispheres 107.9
2436 Male, age 74, both hemispheres 86.3
1891 Female, age 85, both hemispheres 85.1
2620 Female, age 94, left hemisphere 67.8
2861 Female, age 67, both hemispheres 58.7
Parahippocampal cortex
nTPM: 76.0
1850 Male, age 80, both hemispheres 103.0
1933 Female, age 85, both hemispheres 87.0
1990 Female, age 91, right hemisphere 84.7
2018 Male, age 76, both hemispheres 84.6
2250 Female, age 67, right hemisphere 76.8
2532 Female, age 72, left hemisphere 73.5
2245 Female, age 91, both hemispheres 71.2
2692 Male, age 74, both hemispheres 66.0
2693 Female, age 94, both hemispheres 62.6
2622 Female, age 67, right hemisphere 51.1
Perirhinal gyrus
nTPM: 88.7
1847 Female, age 91, left hemisphere 103.8
1794 Male, age 80, right hemisphere 94.0
1841 Female, age 85, right hemisphere 91.8
2848 Male, age 76, right hemisphere 77.9
2521 Female, age 94, right hemisphere 75.8
Subiculum
nTPM: 83.1
1901 Male, age 80, both hemispheres 95.6
2729 Female, age 91, right hemisphere 89.3
1977 Female, age 85, both hemispheres 85.9
2042 Male, age 76, both hemispheres 82.1
2619 Male, age 74, both hemispheres 76.1
2438 Female, age 94, left hemisphere 69.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.4
Samples: 197

Max nTPM: 143.5
Min nTPM: 30.6
Std nTPM: 13.8
Median nTPM: 56.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 143.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 109.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 99.0
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 92.6
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 87.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 85.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 85.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 84.0
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 83.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 82.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 82.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 136.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 136.4
FF:10169-103B7 60 years, female 185.9
FF:10153-102I9 76 years, female 86.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 70.6
Pig sample Sample description nTPM
Subiculum
nTPM: 65.1
Samples: 4

Max nTPM: 86.9
Min nTPM: 53.1
Sample A Female 86.9
Sample B Female 65.6
Sample C Male 53.1
Sample D Male 54.9
Dorsal hippocampus
nTPM: 70.7
Samples: 4

Max nTPM: 86.3
Min nTPM: 50.2
Sample A Female 86.3
Sample B Female 74.1
Sample C Male 72.0
Sample D Male 50.2
Entorhinal cortex
nTPM: 62.6
Samples: 4

Max nTPM: 78.6
Min nTPM: 47.3
Sample A Female 58.3
Sample B Female 78.6
Sample C Male 66.2
Sample D Male 47.3
Ventral hippocampus
nTPM: 61.4
Samples: 4

Max nTPM: 70.4
Min nTPM: 54.4
Sample A Female 70.4
Sample B Female 58.3
Sample C Male 62.4
Sample D Male 54.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 163.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 163.2
Samples: 4

Max nTPM: 170.0
Min nTPM: 154.6
Sample A Male 170.0
Sample B Male 164.1
Sample C Female 164.1
Sample D Female 154.6
Hippocampal formation
nTPM: 157.7
Samples: 4

Max nTPM: 169.1
Min nTPM: 146.5
Sample A Male 169.1
Sample B Male 166.1
Sample C Female 146.5
Sample D Female 149.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.3
1704 Antisense, RP_040604_01_G12, Mouse strain C57BL/6J (56 days, male) 1.3

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