HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
RNA expressioni
Consensus:46.3 nTPM
HPA Brain:47.6 nTPM
GTEx:46.3 nTPM
FANTOM5:130.5 Scaled Tags Per Million
Pig:45.2 nTPM
Mouse:22.7 nTPM
Allen mouse:11.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA001378
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 47.6
Sample id Sample description nTPM
Hippocampus
nTPM: 42.9
2529 Female, age 94, left hemisphere 54.4
2621 Female, age 67, right hemisphere 44.9
1911 Female, age 85, right hemisphere 43.3
2148 Female, age 91, left hemisphere 41.7
1855 Male, age 76, left hemisphere 37.3
1898 Male, age 80, left hemisphere 35.6
Dentate gyrus
nTPM: 42.7
2530 Female, age 94, left hemisphere 54.9
2531 Female, age 67, both hemispheres 50.9
2246 Female, age 85, both hemispheres 42.9
2010 Male, age 76, both hemispheres 42.6
2528 Male, age 74, both hemispheres 32.7
1927 Female, age 91, both hemispheres 32.2
Entorhinal gyrus
nTPM: 41.2
2686 Male, age 75, right hemisphere 54.0
2117 Female, age 91, right hemisphere 43.4
1938 Female, age 85, left hemisphere 39.8
1787 Male, age 76, left hemisphere 38.5
2613 Female, age 94, left hemisphere 36.6
2764 Male, age 80, right hemisphere 34.8
Hippocampus, CA1
nTPM: 39.8
2527 Male, age 74, both hemispheres 43.3
2749 Male, age 80, left hemisphere 41.9
2045 Male, age 76, both hemispheres 40.3
1873 Female, age 85, both hemispheres 40.0
2082 Female, age 91, right hemisphere 33.8
Hippocampus, CA2
nTPM: 39.2
2437 Female, age 94, left hemisphere 46.9
1892 Male, age 76, both hemispheres 46.3
1940 Female, age 85, left hemisphere 39.1
2113 Female, age 91, right hemisphere 36.2
2249 Male, age 74, both hemispheres 34.2
1963 Male, age 80, left hemisphere 32.5
Hippocampus, CA3
nTPM: 45.1
2436 Male, age 74, both hemispheres 56.3
1867 Male, age 76, both hemispheres 51.1
2137 Male, age 80, left hemisphere 48.7
2861 Female, age 67, both hemispheres 42.7
1891 Female, age 85, both hemispheres 42.1
2620 Female, age 94, left hemisphere 29.7
Parahippocampal cortex
nTPM: 40.5
2245 Female, age 91, both hemispheres 52.5
2622 Female, age 67, right hemisphere 47.3
2532 Female, age 72, left hemisphere 46.6
2692 Male, age 74, both hemispheres 45.2
2018 Male, age 76, both hemispheres 43.9
1850 Male, age 80, both hemispheres 36.8
1933 Female, age 85, both hemispheres 36.4
2250 Female, age 67, right hemisphere 34.0
1990 Female, age 91, right hemisphere 33.0
2693 Female, age 94, both hemispheres 28.9
Perirhinal gyrus
nTPM: 32.0
2848 Male, age 76, right hemisphere 36.5
1841 Female, age 85, right hemisphere 33.3
1847 Female, age 91, left hemisphere 30.8
2521 Female, age 94, right hemisphere 30.2
1794 Male, age 80, right hemisphere 29.1
Subiculum
nTPM: 47.6
2438 Female, age 94, left hemisphere 67.1
2042 Male, age 76, both hemispheres 57.5
1901 Male, age 80, both hemispheres 47.8
2619 Male, age 74, both hemispheres 41.6
1977 Female, age 85, both hemispheres 38.2
2729 Female, age 91, right hemisphere 33.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 46.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 46.3
Samples: 197

Max nTPM: 82.3
Min nTPM: 16.4
Std nTPM: 10.0
Median nTPM: 45.5
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 82.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 79.6
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 76.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 74.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 73.6
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 73.5
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 68.9
GTEX-16XZZ-0011-R1a-SM-7LTAH 60-69 years, male 65.9
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 63.6
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 61.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 61.7
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 130.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 130.5
FF:10153-102I9 76 years, female 153.1
FF:10169-103B7 60 years, female 108.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 45.2
Pig sample Sample description nTPM
Subiculum
nTPM: 43.6
Samples: 4

Max nTPM: 47.7
Min nTPM: 38.7
Sample A Female 46.1
Sample B Female 41.7
Sample C Male 38.7
Sample D Male 47.7
Dorsal hippocampus
nTPM: 45.2
Samples: 4

Max nTPM: 53.7
Min nTPM: 38.4
Sample A Female 40.6
Sample B Female 38.4
Sample C Male 53.7
Sample D Male 48.2
Entorhinal cortex
nTPM: 40.4
Samples: 4

Max nTPM: 48.4
Min nTPM: 33.2
Sample A Female 44.6
Sample B Female 35.5
Sample C Male 33.2
Sample D Male 48.4
Ventral hippocampus
nTPM: 41.8
Samples: 4

Max nTPM: 44.7
Min nTPM: 38.3
Sample A Female 40.0
Sample B Female 44.7
Sample C Male 38.3
Sample D Male 44.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 22.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.1
Samples: 4

Max nTPM: 24.4
Min nTPM: 19.0
Sample A Male 23.3
Sample B Male 24.4
Sample C Female 21.5
Sample D Female 19.0
Hippocampal formation
nTPM: 22.8
Samples: 4

Max nTPM: 24.9
Min nTPM: 20.6
Sample A Male 23.2
Sample B Male 24.9
Sample C Female 20.6
Sample D Female 22.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.2
69816386 Antisense, RP_050505_04_H09, Mouse strain C57BL/6J (56 days, male) 11.7
70919603 Antisense, RP_050713_01_F09, Mouse strain C57BL/6J (56 days, male) 10.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org