HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:34.9 nTPM
HPA Brain:31.8 nTPM
GTEx:34.9 nTPM
FANTOM5:49.4 Scaled Tags Per Million
Pig:54.8 nTPM
Mouse:85.1 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA057387
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.8
Sample id Sample description nTPM
Hippocampus
nTPM: 30.5
1898 Male, age 80, left hemisphere 39.9
1855 Male, age 76, left hemisphere 30.4
2148 Female, age 91, left hemisphere 29.5
2529 Female, age 94, left hemisphere 28.5
1911 Female, age 85, right hemisphere 27.8
2621 Female, age 67, right hemisphere 26.9
Dentate gyrus
nTPM: 29.0
2530 Female, age 94, left hemisphere 36.0
2010 Male, age 76, both hemispheres 31.9
1927 Female, age 91, both hemispheres 30.8
2528 Male, age 74, both hemispheres 27.3
2246 Female, age 85, both hemispheres 25.3
2531 Female, age 67, both hemispheres 22.8
Entorhinal gyrus
nTPM: 28.3
1938 Female, age 85, left hemisphere 33.5
2117 Female, age 91, right hemisphere 33.3
2764 Male, age 80, right hemisphere 29.7
1787 Male, age 76, left hemisphere 27.5
2613 Female, age 94, left hemisphere 23.8
2686 Male, age 75, right hemisphere 22.0
Hippocampus, CA1
nTPM: 31.8
2749 Male, age 80, left hemisphere 50.3
1873 Female, age 85, both hemispheres 33.2
2527 Male, age 74, both hemispheres 30.9
2045 Male, age 76, both hemispheres 26.5
2082 Female, age 91, right hemisphere 18.0
Hippocampus, CA2
nTPM: 29.9
1892 Male, age 76, both hemispheres 36.7
1963 Male, age 80, left hemisphere 33.2
2249 Male, age 74, both hemispheres 29.4
2437 Female, age 94, left hemisphere 29.2
1940 Female, age 85, left hemisphere 28.6
2113 Female, age 91, right hemisphere 22.3
Hippocampus, CA3
nTPM: 31.5
1867 Male, age 76, both hemispheres 36.6
2436 Male, age 74, both hemispheres 35.1
2137 Male, age 80, left hemisphere 33.5
2620 Female, age 94, left hemisphere 30.4
1891 Female, age 85, both hemispheres 28.4
2861 Female, age 67, both hemispheres 24.7
Parahippocampal cortex
nTPM: 27.2
1850 Male, age 80, both hemispheres 31.8
1933 Female, age 85, both hemispheres 30.8
1990 Female, age 91, right hemisphere 30.7
2245 Female, age 91, both hemispheres 30.3
2018 Male, age 76, both hemispheres 29.4
2532 Female, age 72, left hemisphere 28.7
2250 Female, age 67, right hemisphere 28.1
2692 Male, age 74, both hemispheres 22.7
2693 Female, age 94, both hemispheres 22.3
2622 Female, age 67, right hemisphere 17.3
Perirhinal gyrus
nTPM: 28.4
1847 Female, age 91, left hemisphere 33.2
1841 Female, age 85, right hemisphere 30.5
1794 Male, age 80, right hemisphere 28.0
2848 Male, age 76, right hemisphere 25.7
2521 Female, age 94, right hemisphere 24.9
Subiculum
nTPM: 28.6
1901 Male, age 80, both hemispheres 35.1
1977 Female, age 85, both hemispheres 32.5
2042 Male, age 76, both hemispheres 32.3
2619 Male, age 74, both hemispheres 28.5
2438 Female, age 94, left hemisphere 22.4
2729 Female, age 91, right hemisphere 20.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 34.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 34.9
Samples: 197

Max nTPM: 71.3
Min nTPM: 16.3
Std nTPM: 10.1
Median nTPM: 33.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 71.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 70.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 65.4
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 64.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 59.5
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 56.9
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 56.6
GTEX-1A3MX-0011-R1b-SM-7P8PH 60-69 years, male 55.5
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 54.1
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 52.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 49.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 49.4
FF:10169-103B7 60 years, female 58.1
FF:10153-102I9 76 years, female 40.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.8
Pig sample Sample description nTPM
Subiculum
nTPM: 34.7
Samples: 4

Max nTPM: 47.5
Min nTPM: 29.6
Sample A Female 47.5
Sample B Female 31.9
Sample C Male 29.8
Sample D Male 29.6
Dorsal hippocampus
nTPM: 54.8
Samples: 4

Max nTPM: 71.7
Min nTPM: 43.2
Sample A Female 71.7
Sample B Female 55.9
Sample C Male 43.2
Sample D Male 48.2
Entorhinal cortex
nTPM: 41.5
Samples: 4

Max nTPM: 55.3
Min nTPM: 28.5
Sample A Female 43.6
Sample B Female 55.3
Sample C Male 38.6
Sample D Male 28.5
Ventral hippocampus
nTPM: 44.3
Samples: 4

Max nTPM: 51.0
Min nTPM: 33.0
Sample A Female 51.0
Sample B Female 33.0
Sample C Male 46.6
Sample D Male 46.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 85.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 76.2
Samples: 4

Max nTPM: 83.4
Min nTPM: 72.8
Sample A Male 74.0
Sample B Male 74.4
Sample C Female 83.4
Sample D Female 72.8
Hippocampal formation
nTPM: 85.1
Samples: 4

Max nTPM: 95.9
Min nTPM: 75.5
Sample A Male 95.9
Sample B Male 75.5
Sample C Female 88.3
Sample D Female 80.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
70474791 Antisense, RP_050623_01_A04, Mouse strain C57BL/6J (56 days, male) 0.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org