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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
249.5
nTPM
FANTOM5:
255.1
Scaled Tags Per Million
Pig:
51.0
nTPM
Allen mouse:
4.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
249.5
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 249.5
2301
Female, age 85, both hemispheres
319.8
2188
Female, age 91, both hemispheres
268.5
2090
Male, age 80, both hemispheres
255.6
1984
Male, age 76, both hemispheres
154.3
Dorsal cochlear nucleus nTPM: 207.0
2187
Female, age 91, both hemispheres
264.8
2378
Male, age 80, both hemispheres
226.0
2802
Male, age 74, right hemisphere
208.9
2058
Male, age 76, both hemispheres
168.7
2370
Male, age 61, both hemispheres
166.5
Dorsal tegmental nucleus nTPM: 179.1
2083
Male, age 80, both hemispheres
226.9
2326
Male, age 74, both hemispheres
185.8
1936
Male, age 76, left hemisphere
161.4
2358
Male, age 61, both hemispheres
142.2
Dorsolateral tegmental area nTPM: 201.8
2751
Female, age 85, both hemispheres
307.6
2337
Male, age 61, both hemispheres
260.1
2654
Male, age 80, both hemispheres
235.7
2360
Male, age 74, both hemispheres
115.7
2141
Male, age 76, both hemispheres
90.0
Kolliker-Fuse nucleus nTPM: 209.2
2793
Female, age 91, left hemisphere
257.7
2163
Male, age 80, both hemispheres
193.8
2315
Male, age 76, right hemisphere
176.0
Lateral lemniscal nuclei nTPM: 171.0
2320
Female, age 91, left hemisphere
215.3
2169
Male, age 76, both hemispheres
164.8
2453
Male, age 74, right hemisphere
158.7
2036
Male, age 80, both hemispheres
158.3
2746
Female, age 85, left hemisphere
158.2
Lateral parabrachial nucleus nTPM: 218.0
2792
Male, age 76, both hemispheres
314.7
2790
Male, age 61, both hemispheres
233.2
2013
Male, age 80, both hemispheres
203.1
2139
Female, age 85, right hemisphere
120.9
Lateral vestibular nucleus nTPM: 223.5
2311
Male, age 80, both hemispheres
269.0
2184
Male, age 76, both hemispheres
178.0
Locus coeruleus nTPM: 90.6
2162
Male, age 80, both hemispheres
126.1
2720
Male, age 74, both hemispheres
121.3
2123
Female, age 91, both hemispheres
88.5
2317
Female, age 72, unknown
83.3
2788
Male, age 74, unknown
81.9
2014
Male, age 55, unknown
74.0
1980
Male, age 76, both hemispheres
59.1
Medial parabrachial nucleus nTPM: 249.4
2170
Female, age 91, both hemispheres
350.0
2463
Female, age 85, right hemisphere
270.8
2854
Male, age 80, both hemispheres
231.2
2156
Male, age 61, both hemispheres
204.0
2786
Male, age 76, both hemispheres
190.7
Medial periolivary nuclei nTPM: 177.3
2081
Male, age 80, both hemispheres
225.9
2458
Female, age 91, both hemispheres
212.6
2063
Male, age 76, both hemispheres
168.6
2791
Male, age 74, right hemisphere
151.1
2171
Female, age 85, both hemispheres
128.4
Motor facial nucleus nTPM: 181.9
2126
Male, age 61, both hemispheres
251.7
2697
Female, age 85, both hemispheres
202.0
2795
Female, age 91, both hemispheres
195.8
2365
Male, age 74, right hemisphere
167.3
2327
Male, age 80, both hemispheres
140.6
2062
Male, age 76, both hemispheres
133.9
Motor trigeminal nucleus nTPM: 179.8
2321
Female, age 91, both hemispheres
222.5
2560
Male, age 74, both hemispheres
178.4
2309
Male, age 76, both hemispheres
173.9
2335
Male, age 61, both hemispheres
170.4
2079
Male, age 80, both hemispheres
153.8
Nuclei of the trapezoid body nTPM: 160.9
2166
Male, age 80, both hemispheres
203.0
2368
Female, age 91, both hemispheres
193.1
2159
Male, age 61, both hemispheres
154.7
1983
Male, age 76, both hemispheres
145.6
2735
Female, age 85, both hemispheres
108.0
Nucleus raphe magnus nTPM: 152.7
2051
Male, age 76, both hemispheres
222.8
2459
Female, age 91, both hemispheres
201.5
2328
Male, age 80, both hemispheres
170.0
2455
Male, age 74, both hemispheres
136.5
2160
Male, age 61, both hemispheres
96.9
2172
Female, age 85, both hemispheres
88.8
Paramedian reticular nucleus nTPM: 213.3
2052
Male, age 76, both hemispheres
313.8
2057
Male, age 80, both hemispheres
209.6
2050
Female, age 85, both hemispheres
185.3
2313
Male, age 61, both hemispheres
144.5
Pedunculopontine tegmental nucleus nTPM: 183.3
2338
Male, age 61, both hemispheres
239.0
2334
Male, age 80, both hemispheres
178.2
1921
Female, age 85, both hemispheres
132.7
Pontine nuclei nTPM: 176.9
2319
Female, age 91, both hemispheres
243.3
2109
Female, age 72, unknown
207.2
2454
Male, age 74, left hemisphere
207.0
2115
Male, age 80, left hemisphere
187.3
1863
Male, age 55, unknown
176.1
1968
Male, age 76, left hemisphere
169.3
2727
Male, age 61, right hemisphere
119.2
2787
Female, age 85, both hemispheres
105.7
Pontine raphe nucleus nTPM: 116.5
2122
Female, age 85, midline
126.6
2853
Male, age 76, midline
106.4
Posteroventral cochlear nucleus nTPM: 244.1
2341
Male, age 80, both hemispheres
363.2
2135
Female, age 91, both hemispheres
284.4
2371
Male, age 61, both hemispheres
217.9
2070
Male, age 76, both hemispheres
204.3
2752
Female, age 85, both hemispheres
150.6
Principal sensory trigeminal nucleus nTPM: 174.2
2367
Female, age 91, left hemisphere
244.8
2324
Male, age 76, both hemispheres
174.5
2158
Male, age 61, both hemispheres
140.0
2008
Male, age 80, left hemisphere
137.6
Reticular pontine nucleus, caudal nTPM: 199.6
2457
Female, age 91, both hemispheres
236.7
2559
Male, age 74, both hemispheres
232.0
2092
Male, age 76, both hemispheres
198.7
2332
Male, age 80, right hemisphere
130.9
Reticular pontine nucleus, oral nTPM: 207.0
2366
Female, age 91, both hemispheres
221.1
1939
Male, age 80, both hemispheres
217.6
2361
Male, age 74, both hemispheres
209.5
2167
Male, age 76, both hemispheres
195.8
2012
Female, age 85, both hemispheres
191.0
Reticulotegmental nucleus nTPM: 187.7
2322
Female, age 91, both hemispheres
252.6
2333
Male, age 80, both hemispheres
189.9
2452
Male, age 74, both hemispheres
185.5
2325
Male, age 76, both hemispheres
122.9
Spinal trigeminal nucleus, oral nTPM: 164.6
2164
Male, age 80, both hemispheres
210.8
1978
Male, age 76, both hemispheres
151.6
2737
Female, age 85, both hemispheres
131.4
Subcoeruleus area nTPM: 193.2
2369
Female, age 85, left hemisphere
345.4
1958
Male, age 80, both hemispheres
183.6
2089
Male, age 76, left hemisphere
168.6
2451
Male, age 74, both hemispheres
153.2
2323
Female, age 91, left hemisphere
115.2
Superior olive nTPM: 186.4
2020
Male, age 76, both hemispheres
243.0
2561
Female, age 91, both hemispheres
197.6
2329
Male, age 80, right hemisphere
195.0
2364
Male, age 74, right hemisphere
154.5
1875
Female, age 85, both hemispheres
142.1
Ventral periolivary nuclei nTPM: 174.0
2023
Male, age 76, both hemispheres
248.0
2165
Male, age 80, both hemispheres
163.9
2794
Female, age 91, left hemisphere
160.6
2130
Female, age 85, both hemispheres
123.6
Ventrolateral tegmental area, A5 NE cell group nTPM: 194.4
2359
Male, age 61, both hemispheres
242.5
2456
Female, age 91, both hemispheres
221.7
1959
Male, age 76, both hemispheres
187.3
2161
Male, age 80, both hemispheres
185.4
2840
Female, age 85, both hemispheres
183.3
2449
Male, age 74, both hemispheres
146.1
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
51.0
Pig sample
Sample description
nTPM
Pons nTPM: 51.0
Samples: 4
Max nTPM: 57.5
Min nTPM: 41.6
Sample A
Female
55.9
Sample B
Female
41.6
Sample C
Male
49.1
Sample D
Male
57.5
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
