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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
235.3
nTPM
FANTOM5:
320.7
Scaled Tags Per Million
Pig:
50.4
nTPM
Allen mouse:
4.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
235.3
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 144.1
2301
Female, age 85, both hemispheres
152.0
1984
Male, age 76, both hemispheres
144.8
2188
Female, age 91, both hemispheres
142.4
2090
Male, age 80, both hemispheres
137.3
Dorsal cochlear nucleus nTPM: 149.9
2802
Male, age 74, right hemisphere
169.8
2058
Male, age 76, both hemispheres
156.5
2370
Male, age 61, both hemispheres
147.6
2187
Female, age 91, both hemispheres
146.2
2378
Male, age 80, both hemispheres
129.6
Dorsal tegmental nucleus nTPM: 148.0
2083
Male, age 80, both hemispheres
182.4
2326
Male, age 74, both hemispheres
149.7
1936
Male, age 76, left hemisphere
135.3
2358
Male, age 61, both hemispheres
124.4
Dorsolateral tegmental area nTPM: 139.7
2654
Male, age 80, both hemispheres
174.8
2751
Female, age 85, both hemispheres
150.6
2141
Male, age 76, both hemispheres
134.5
2360
Male, age 74, both hemispheres
127.7
2337
Male, age 61, both hemispheres
111.0
Kolliker-Fuse nucleus nTPM: 158.4
2163
Male, age 80, both hemispheres
202.2
2793
Female, age 91, left hemisphere
163.5
2315
Male, age 76, right hemisphere
109.5
Lateral lemniscal nuclei nTPM: 209.9
2169
Male, age 76, both hemispheres
253.3
2036
Male, age 80, both hemispheres
231.0
2453
Male, age 74, right hemisphere
212.0
2746
Female, age 85, left hemisphere
203.1
2320
Female, age 91, left hemisphere
150.3
Lateral parabrachial nucleus nTPM: 163.2
2139
Female, age 85, right hemisphere
223.7
2013
Male, age 80, both hemispheres
163.3
2790
Male, age 61, both hemispheres
162.5
2792
Male, age 76, both hemispheres
103.1
Lateral vestibular nucleus nTPM: 172.3
2184
Male, age 76, both hemispheres
184.5
2311
Male, age 80, both hemispheres
160.1
Locus coeruleus nTPM: 171.5
2123
Female, age 91, both hemispheres
192.7
2014
Male, age 55, unknown
186.1
2720
Male, age 74, both hemispheres
177.7
2162
Male, age 80, both hemispheres
170.6
2317
Female, age 72, unknown
168.4
2788
Male, age 74, unknown
157.0
1980
Male, age 76, both hemispheres
148.3
Medial parabrachial nucleus nTPM: 162.8
2854
Male, age 80, both hemispheres
183.4
2156
Male, age 61, both hemispheres
177.2
2170
Female, age 91, both hemispheres
171.8
2786
Male, age 76, both hemispheres
146.2
2463
Female, age 85, right hemisphere
135.5
Medial periolivary nuclei nTPM: 201.3
2171
Female, age 85, both hemispheres
275.2
2063
Male, age 76, both hemispheres
264.2
2791
Male, age 74, right hemisphere
177.2
2081
Male, age 80, both hemispheres
149.8
2458
Female, age 91, both hemispheres
140.1
Motor facial nucleus nTPM: 197.1
2062
Male, age 76, both hemispheres
277.9
2365
Male, age 74, right hemisphere
202.2
2327
Male, age 80, both hemispheres
191.6
2697
Female, age 85, both hemispheres
182.8
2126
Male, age 61, both hemispheres
165.8
2795
Female, age 91, both hemispheres
162.5
Motor trigeminal nucleus nTPM: 174.5
2079
Male, age 80, both hemispheres
203.5
2560
Male, age 74, both hemispheres
186.3
2309
Male, age 76, both hemispheres
171.1
2335
Male, age 61, both hemispheres
168.1
2321
Female, age 91, both hemispheres
143.2
Nuclei of the trapezoid body nTPM: 234.3
2159
Male, age 61, both hemispheres
300.6
2735
Female, age 85, both hemispheres
277.6
1983
Male, age 76, both hemispheres
251.1
2166
Male, age 80, both hemispheres
194.3
2368
Female, age 91, both hemispheres
148.1
Nucleus raphe magnus nTPM: 229.2
2160
Male, age 61, both hemispheres
327.9
2172
Female, age 85, both hemispheres
290.7
2455
Male, age 74, both hemispheres
224.9
2051
Male, age 76, both hemispheres
203.2
2328
Male, age 80, both hemispheres
184.3
2459
Female, age 91, both hemispheres
144.3
Paramedian reticular nucleus nTPM: 186.4
2050
Female, age 85, both hemispheres
231.6
2057
Male, age 80, both hemispheres
204.0
2313
Male, age 61, both hemispheres
175.4
2052
Male, age 76, both hemispheres
134.6
Pedunculopontine tegmental nucleus nTPM: 147.7
2334
Male, age 80, both hemispheres
159.0
1921
Female, age 85, both hemispheres
158.2
2338
Male, age 61, both hemispheres
126.0
Pontine nuclei nTPM: 235.3
2787
Female, age 85, both hemispheres
318.9
2727
Male, age 61, right hemisphere
305.2
1863
Male, age 55, unknown
293.5
2109
Female, age 72, unknown
245.4
1968
Male, age 76, left hemisphere
236.2
2454
Male, age 74, left hemisphere
183.1
2115
Male, age 80, left hemisphere
157.2
2319
Female, age 91, both hemispheres
143.0
Pontine raphe nucleus nTPM: 179.2
2122
Female, age 85, midline
221.4
2853
Male, age 76, midline
137.1
Posteroventral cochlear nucleus nTPM: 142.7
2752
Female, age 85, both hemispheres
193.0
2070
Male, age 76, both hemispheres
159.0
2371
Male, age 61, both hemispheres
142.0
2341
Male, age 80, both hemispheres
113.6
2135
Female, age 91, both hemispheres
106.1
Principal sensory trigeminal nucleus nTPM: 210.1
2158
Male, age 61, both hemispheres
301.6
2008
Male, age 80, left hemisphere
228.7
2324
Male, age 76, both hemispheres
165.6
2367
Female, age 91, left hemisphere
144.7
Reticular pontine nucleus, caudal nTPM: 180.5
2332
Male, age 80, right hemisphere
203.9
2092
Male, age 76, both hemispheres
198.8
2559
Male, age 74, both hemispheres
166.5
2457
Female, age 91, both hemispheres
152.8
Reticular pontine nucleus, oral nTPM: 174.2
2361
Male, age 74, both hemispheres
210.4
2012
Female, age 85, both hemispheres
209.7
1939
Male, age 80, both hemispheres
166.0
2167
Male, age 76, both hemispheres
151.6
2366
Female, age 91, both hemispheres
133.2
Reticulotegmental nucleus nTPM: 166.1
2325
Male, age 76, both hemispheres
179.5
2452
Male, age 74, both hemispheres
178.7
2333
Male, age 80, both hemispheres
160.4
2322
Female, age 91, both hemispheres
145.9
Spinal trigeminal nucleus, oral nTPM: 165.1
2737
Female, age 85, both hemispheres
174.0
2164
Male, age 80, both hemispheres
171.4
1978
Male, age 76, both hemispheres
149.8
Subcoeruleus area nTPM: 172.1
2089
Male, age 76, left hemisphere
201.5
1958
Male, age 80, both hemispheres
200.9
2323
Female, age 91, left hemisphere
168.5
2451
Male, age 74, both hemispheres
154.2
2369
Female, age 85, left hemisphere
135.6
Superior olive nTPM: 192.0
1875
Female, age 85, both hemispheres
255.2
2020
Male, age 76, both hemispheres
200.3
2329
Male, age 80, right hemisphere
179.2
2364
Male, age 74, right hemisphere
173.2
2561
Female, age 91, both hemispheres
152.1
Ventral periolivary nuclei nTPM: 209.7
2130
Female, age 85, both hemispheres
290.5
2165
Male, age 80, both hemispheres
219.6
2023
Male, age 76, both hemispheres
175.0
2794
Female, age 91, left hemisphere
153.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 173.5
2449
Male, age 74, both hemispheres
209.1
1959
Male, age 76, both hemispheres
202.8
2840
Female, age 85, both hemispheres
182.1
2161
Male, age 80, both hemispheres
165.3
2359
Male, age 61, both hemispheres
143.6
2456
Female, age 91, both hemispheres
138.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
50.4
Pig sample
Sample description
nTPM
Pons nTPM: 50.4
Samples: 4
Max nTPM: 72.8
Min nTPM: 39.1
Sample A
Female
72.8
Sample B
Female
39.1
Sample C
Male
41.5
Sample D
Male
48.3
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
