HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:178.8 nTPM
HPA Brain:139.5 nTPM
GTEx:178.8 nTPM
FANTOM5:148.4 Scaled Tags Per Million
Pig:25.1 nTPM
Mouse:29.6 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035638
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 139.5
Sample id Sample description nTPM
Hippocampus
nTPM: 122.9
1911 Female, age 85, right hemisphere 150.0
2529 Female, age 94, left hemisphere 139.6
2621 Female, age 67, right hemisphere 133.6
2148 Female, age 91, left hemisphere 112.9
1855 Male, age 76, left hemisphere 101.1
1898 Male, age 80, left hemisphere 100.1
Dentate gyrus
nTPM: 102.1
2530 Female, age 94, left hemisphere 124.5
2010 Male, age 76, both hemispheres 123.4
2528 Male, age 74, both hemispheres 105.8
2246 Female, age 85, both hemispheres 96.6
1927 Female, age 91, both hemispheres 90.2
2531 Female, age 67, both hemispheres 71.9
Entorhinal gyrus
nTPM: 101.4
2117 Female, age 91, right hemisphere 140.1
2764 Male, age 80, right hemisphere 131.7
1938 Female, age 85, left hemisphere 119.0
2613 Female, age 94, left hemisphere 77.8
1787 Male, age 76, left hemisphere 71.7
2686 Male, age 75, right hemisphere 67.8
Hippocampus, CA1
nTPM: 97.3
2527 Male, age 74, both hemispheres 135.8
1873 Female, age 85, both hemispheres 93.7
2749 Male, age 80, left hemisphere 92.8
2082 Female, age 91, right hemisphere 86.6
2045 Male, age 76, both hemispheres 77.4
Hippocampus, CA2
nTPM: 121.5
2249 Male, age 74, both hemispheres 191.1
1963 Male, age 80, left hemisphere 133.2
2437 Female, age 94, left hemisphere 121.7
1940 Female, age 85, left hemisphere 103.7
2113 Female, age 91, right hemisphere 99.3
1892 Male, age 76, both hemispheres 79.8
Hippocampus, CA3
nTPM: 103.8
1891 Female, age 85, both hemispheres 142.4
1867 Male, age 76, both hemispheres 127.1
2436 Male, age 74, both hemispheres 106.6
2620 Female, age 94, left hemisphere 95.4
2861 Female, age 67, both hemispheres 88.0
2137 Male, age 80, left hemisphere 63.2
Parahippocampal cortex
nTPM: 99.4
2018 Male, age 76, both hemispheres 137.9
1990 Female, age 91, right hemisphere 124.9
1933 Female, age 85, both hemispheres 114.6
2532 Female, age 72, left hemisphere 109.6
2692 Male, age 74, both hemispheres 106.4
2245 Female, age 91, both hemispheres 99.9
1850 Male, age 80, both hemispheres 76.4
2693 Female, age 94, both hemispheres 76.4
2622 Female, age 67, right hemisphere 75.9
2250 Female, age 67, right hemisphere 71.8
Perirhinal gyrus
nTPM: 66.7
2521 Female, age 94, right hemisphere 82.3
1847 Female, age 91, left hemisphere 68.7
1841 Female, age 85, right hemisphere 66.9
1794 Male, age 80, right hemisphere 59.5
2848 Male, age 76, right hemisphere 55.8
Subiculum
nTPM: 139.5
2042 Male, age 76, both hemispheres 179.2
1901 Male, age 80, both hemispheres 151.6
1977 Female, age 85, both hemispheres 148.3
2619 Male, age 74, both hemispheres 126.8
2438 Female, age 94, left hemisphere 121.1
2729 Female, age 91, right hemisphere 110.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 178.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 178.8
Samples: 197

Max nTPM: 521.8
Min nTPM: 46.8
Std nTPM: 83.6
Median nTPM: 160.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 521.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 448.8
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 448.0
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 425.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 385.5
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 365.7
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 359.7
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 353.4
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 349.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 345.6
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 339.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 148.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 148.4
FF:10169-103B7 60 years, female 152.6
FF:10153-102I9 76 years, female 144.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 25.1
Pig sample Sample description nTPM
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 26.5
Min nTPM: 20.7
Sample A Female 25.0
Sample B Female 26.5
Sample C Male 22.6
Sample D Male 20.7
Dorsal hippocampus
nTPM: 25.1
Samples: 4

Max nTPM: 31.6
Min nTPM: 18.2
Sample A Female 31.6
Sample B Female 24.6
Sample C Male 26.0
Sample D Male 18.2
Entorhinal cortex
nTPM: 24.3
Samples: 4

Max nTPM: 30.9
Min nTPM: 20.6
Sample A Female 20.6
Sample B Female 30.9
Sample C Male 23.0
Sample D Male 22.6
Ventral hippocampus
nTPM: 24.7
Samples: 4

Max nTPM: 25.5
Min nTPM: 23.7
Sample A Female 25.5
Sample B Female 25.0
Sample C Male 23.7
Sample D Male 24.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 28.7
Samples: 4

Max nTPM: 30.8
Min nTPM: 26.0
Sample A Male 29.0
Sample B Male 29.0
Sample C Female 30.8
Sample D Female 26.0
Hippocampal formation
nTPM: 29.6
Samples: 4

Max nTPM: 33.8
Min nTPM: 27.6
Sample A Male 33.8
Sample B Male 27.9
Sample C Female 27.6
Sample D Female 29.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69114097 Antisense, RP_050317_01_B07, Mouse strain C57BL/6J (56 days, male) 0.1

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