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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
162.2
nTPM
FANTOM5:
143.3
Scaled Tags Per Million
Pig:
36.5
nTPM
Allen mouse:
0.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
162.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 139.2
1984
Male, age 76, both hemispheres
164.7
2188
Female, age 91, both hemispheres
142.6
2090
Male, age 80, both hemispheres
126.7
2301
Female, age 85, both hemispheres
122.9
Dorsal cochlear nucleus nTPM: 162.2
2370
Male, age 61, both hemispheres
206.4
2378
Male, age 80, both hemispheres
183.3
2802
Male, age 74, right hemisphere
176.6
2187
Female, age 91, both hemispheres
127.4
2058
Male, age 76, both hemispheres
117.1
Dorsal tegmental nucleus nTPM: 150.7
2083
Male, age 80, both hemispheres
195.4
1936
Male, age 76, left hemisphere
170.1
2326
Male, age 74, both hemispheres
125.1
2358
Male, age 61, both hemispheres
112.4
Dorsolateral tegmental area nTPM: 137.3
2654
Male, age 80, both hemispheres
190.5
2751
Female, age 85, both hemispheres
162.6
2337
Male, age 61, both hemispheres
125.7
2141
Male, age 76, both hemispheres
107.7
2360
Male, age 74, both hemispheres
100.0
Kolliker-Fuse nucleus nTPM: 133.8
2793
Female, age 91, left hemisphere
167.5
2163
Male, age 80, both hemispheres
125.7
2315
Male, age 76, right hemisphere
108.2
Lateral lemniscal nuclei nTPM: 150.7
2320
Female, age 91, left hemisphere
189.7
2036
Male, age 80, both hemispheres
155.1
2169
Male, age 76, both hemispheres
138.8
2453
Male, age 74, right hemisphere
136.5
2746
Female, age 85, left hemisphere
133.3
Lateral parabrachial nucleus nTPM: 132.0
2013
Male, age 80, both hemispheres
166.4
2792
Male, age 76, both hemispheres
156.8
2139
Female, age 85, right hemisphere
125.0
2790
Male, age 61, both hemispheres
79.8
Lateral vestibular nucleus nTPM: 120.1
2184
Male, age 76, both hemispheres
126.2
2311
Male, age 80, both hemispheres
114.0
Locus coeruleus nTPM: 116.1
2317
Female, age 72, unknown
128.9
2123
Female, age 91, both hemispheres
124.6
2162
Male, age 80, both hemispheres
119.1
2720
Male, age 74, both hemispheres
118.8
2014
Male, age 55, unknown
117.7
1980
Male, age 76, both hemispheres
114.4
2788
Male, age 74, unknown
89.4
Medial parabrachial nucleus nTPM: 124.7
2463
Female, age 85, right hemisphere
155.1
2786
Male, age 76, both hemispheres
152.0
2170
Female, age 91, both hemispheres
117.8
2854
Male, age 80, both hemispheres
109.0
2156
Male, age 61, both hemispheres
89.7
Medial periolivary nuclei nTPM: 111.9
2081
Male, age 80, both hemispheres
130.2
2458
Female, age 91, both hemispheres
123.6
2063
Male, age 76, both hemispheres
113.1
2791
Male, age 74, right hemisphere
106.7
2171
Female, age 85, both hemispheres
85.8
Motor facial nucleus nTPM: 129.3
2795
Female, age 91, both hemispheres
156.5
2062
Male, age 76, both hemispheres
138.1
2327
Male, age 80, both hemispheres
124.1
2126
Male, age 61, both hemispheres
122.2
2365
Male, age 74, right hemisphere
118.1
2697
Female, age 85, both hemispheres
116.9
Motor trigeminal nucleus nTPM: 149.9
2560
Male, age 74, both hemispheres
189.3
2321
Female, age 91, both hemispheres
159.9
2309
Male, age 76, both hemispheres
155.0
2335
Male, age 61, both hemispheres
129.9
2079
Male, age 80, both hemispheres
115.4
Nuclei of the trapezoid body nTPM: 120.0
1983
Male, age 76, both hemispheres
146.3
2368
Female, age 91, both hemispheres
145.8
2166
Male, age 80, both hemispheres
133.0
2159
Male, age 61, both hemispheres
101.4
2735
Female, age 85, both hemispheres
73.6
Nucleus raphe magnus nTPM: 122.8
2328
Male, age 80, both hemispheres
183.4
2459
Female, age 91, both hemispheres
154.3
2051
Male, age 76, both hemispheres
133.5
2455
Male, age 74, both hemispheres
125.5
2160
Male, age 61, both hemispheres
79.0
2172
Female, age 85, both hemispheres
61.1
Paramedian reticular nucleus nTPM: 123.4
2313
Male, age 61, both hemispheres
165.5
2050
Female, age 85, both hemispheres
118.3
2057
Male, age 80, both hemispheres
118.3
2052
Male, age 76, both hemispheres
91.3
Pedunculopontine tegmental nucleus nTPM: 119.8
1921
Female, age 85, both hemispheres
142.5
2334
Male, age 80, both hemispheres
140.1
2338
Male, age 61, both hemispheres
76.8
Pontine nuclei nTPM: 150.5
2454
Male, age 74, left hemisphere
203.0
1968
Male, age 76, left hemisphere
193.6
2115
Male, age 80, left hemisphere
169.4
2109
Female, age 72, unknown
164.5
2319
Female, age 91, both hemispheres
143.0
1863
Male, age 55, unknown
132.6
2787
Female, age 85, both hemispheres
110.2
2727
Male, age 61, right hemisphere
87.5
Pontine raphe nucleus nTPM: 116.0
2853
Male, age 76, midline
126.8
2122
Female, age 85, midline
105.3
Posteroventral cochlear nucleus nTPM: 152.5
2371
Male, age 61, both hemispheres
229.5
2341
Male, age 80, both hemispheres
167.7
2135
Female, age 91, both hemispheres
133.0
2070
Male, age 76, both hemispheres
117.7
2752
Female, age 85, both hemispheres
114.5
Principal sensory trigeminal nucleus nTPM: 118.0
2367
Female, age 91, left hemisphere
137.0
2324
Male, age 76, both hemispheres
136.8
2008
Male, age 80, left hemisphere
115.1
2158
Male, age 61, both hemispheres
83.0
Reticular pontine nucleus, caudal nTPM: 155.6
2457
Female, age 91, both hemispheres
170.2
2092
Male, age 76, both hemispheres
168.9
2559
Male, age 74, both hemispheres
144.8
2332
Male, age 80, right hemisphere
138.3
Reticular pontine nucleus, oral nTPM: 150.9
2366
Female, age 91, both hemispheres
172.1
1939
Male, age 80, both hemispheres
170.8
2167
Male, age 76, both hemispheres
141.3
2012
Female, age 85, both hemispheres
138.4
2361
Male, age 74, both hemispheres
131.8
Reticulotegmental nucleus nTPM: 149.5
2333
Male, age 80, both hemispheres
173.7
2452
Male, age 74, both hemispheres
171.9
2322
Female, age 91, both hemispheres
142.1
2325
Male, age 76, both hemispheres
110.5
Spinal trigeminal nucleus, oral nTPM: 137.0
1978
Male, age 76, both hemispheres
147.7
2164
Male, age 80, both hemispheres
132.3
2737
Female, age 85, both hemispheres
130.8
Subcoeruleus area nTPM: 137.0
2369
Female, age 85, left hemisphere
173.1
2451
Male, age 74, both hemispheres
142.0
1958
Male, age 80, both hemispheres
132.1
2323
Female, age 91, left hemisphere
123.2
2089
Male, age 76, left hemisphere
114.6
Superior olive nTPM: 144.9
2329
Male, age 80, right hemisphere
180.6
2020
Male, age 76, both hemispheres
175.3
2561
Female, age 91, both hemispheres
144.3
1875
Female, age 85, both hemispheres
117.1
2364
Male, age 74, right hemisphere
107.1
Ventral periolivary nuclei nTPM: 109.2
2023
Male, age 76, both hemispheres
165.4
2165
Male, age 80, both hemispheres
114.1
2794
Female, age 91, left hemisphere
88.6
2130
Female, age 85, both hemispheres
68.5
Ventrolateral tegmental area, A5 NE cell group nTPM: 136.0
2456
Female, age 91, both hemispheres
168.3
2161
Male, age 80, both hemispheres
149.0
1959
Male, age 76, both hemispheres
145.7
2449
Male, age 74, both hemispheres
129.6
2840
Female, age 85, both hemispheres
113.9
2359
Male, age 61, both hemispheres
109.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
36.5
Pig sample
Sample description
nTPM
Pons nTPM: 36.5
Samples: 4
Max nTPM: 42.1
Min nTPM: 27.6
Sample A
Female
40.9
Sample B
Female
27.6
Sample C
Male
35.5
Sample D
Male
42.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
