HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:28.5 nTPM
HPA Brain:15.8 nTPM
GTEx:28.5 nTPM
FANTOM5:5.3 Scaled Tags Per Million
Pig:4.5 nTPM
Mouse:74.7 nTPM
Allen mouse:8.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA074402
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.8
Sample id Sample description nTPM
Hippocampus
nTPM: 12.2
1898 Male, age 80, left hemisphere 15.8
2148 Female, age 91, left hemisphere 13.3
1911 Female, age 85, right hemisphere 12.6
2529 Female, age 94, left hemisphere 11.2
1855 Male, age 76, left hemisphere 11.1
2621 Female, age 67, right hemisphere 9.0
Dentate gyrus
nTPM: 13.0
2530 Female, age 94, left hemisphere 17.5
2528 Male, age 74, both hemispheres 15.5
2010 Male, age 76, both hemispheres 13.4
2246 Female, age 85, both hemispheres 12.5
1927 Female, age 91, both hemispheres 10.1
2531 Female, age 67, both hemispheres 9.1
Entorhinal gyrus
nTPM: 13.3
2764 Male, age 80, right hemisphere 16.0
2117 Female, age 91, right hemisphere 15.9
2686 Male, age 75, right hemisphere 14.7
2613 Female, age 94, left hemisphere 13.0
1938 Female, age 85, left hemisphere 10.9
1787 Male, age 76, left hemisphere 9.1
Hippocampus, CA1
nTPM: 12.8
2082 Female, age 91, right hemisphere 23.5
2527 Male, age 74, both hemispheres 11.8
2749 Male, age 80, left hemisphere 10.3
1873 Female, age 85, both hemispheres 9.9
2045 Male, age 76, both hemispheres 8.5
Hippocampus, CA2
nTPM: 15.8
2249 Male, age 74, both hemispheres 24.3
1940 Female, age 85, left hemisphere 17.5
2437 Female, age 94, left hemisphere 15.1
1963 Male, age 80, left hemisphere 14.2
2113 Female, age 91, right hemisphere 12.9
1892 Male, age 76, both hemispheres 10.5
Hippocampus, CA3
nTPM: 12.3
2436 Male, age 74, both hemispheres 24.6
2861 Female, age 67, both hemispheres 12.1
1867 Male, age 76, both hemispheres 11.1
2137 Male, age 80, left hemisphere 10.4
1891 Female, age 85, both hemispheres 9.8
2620 Female, age 94, left hemisphere 6.0
Parahippocampal cortex
nTPM: 12.5
1990 Female, age 91, right hemisphere 16.2
2622 Female, age 67, right hemisphere 14.5
2245 Female, age 91, both hemispheres 13.5
2692 Male, age 74, both hemispheres 12.9
1933 Female, age 85, both hemispheres 12.8
2693 Female, age 94, both hemispheres 12.0
2532 Female, age 72, left hemisphere 11.7
1850 Male, age 80, both hemispheres 11.0
2018 Male, age 76, both hemispheres 10.2
2250 Female, age 67, right hemisphere 10.2
Perirhinal gyrus
nTPM: 11.5
2521 Female, age 94, right hemisphere 17.0
1794 Male, age 80, right hemisphere 13.3
1841 Female, age 85, right hemisphere 9.2
2848 Male, age 76, right hemisphere 9.1
1847 Female, age 91, left hemisphere 9.0
Subiculum
nTPM: 14.2
2438 Female, age 94, left hemisphere 20.8
1901 Male, age 80, both hemispheres 14.0
2042 Male, age 76, both hemispheres 12.9
2619 Male, age 74, both hemispheres 12.9
1977 Female, age 85, both hemispheres 12.2
2729 Female, age 91, right hemisphere 12.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.5
Samples: 197

Max nTPM: 67.8
Min nTPM: 4.9
Std nTPM: 12.1
Median nTPM: 26.7
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 67.8
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 67.4
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 65.6
GTEX-1I1HK-0011-R1b-SM-CM2T7 60-69 years, male 62.3
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 60.9
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 60.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 59.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 58.9
GTEX-1B933-0011-R1b-SM-9QEGW 50-59 years, female 58.6
GTEX-11WQC-0011-R1b-SM-DO932 60-69 years, male 55.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 54.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.3
FF:10153-102I9 76 years, female 7.6
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 4.5
Pig sample Sample description nTPM
Subiculum
nTPM: 4.0
Samples: 4

Max nTPM: 4.7
Min nTPM: 3.5
Sample A Female 4.7
Sample B Female 3.6
Sample C Male 4.0
Sample D Male 3.5
Dorsal hippocampus
nTPM: 3.9
Samples: 4

Max nTPM: 4.4
Min nTPM: 3.4
Sample A Female 4.4
Sample B Female 3.5
Sample C Male 4.1
Sample D Male 3.4
Entorhinal cortex
nTPM: 4.5
Samples: 4

Max nTPM: 5.0
Min nTPM: 4.2
Sample A Female 4.3
Sample B Female 4.5
Sample C Male 5.0
Sample D Male 4.2
Ventral hippocampus
nTPM: 4.0
Samples: 4

Max nTPM: 4.6
Min nTPM: 3.5
Sample A Female 3.7
Sample B Female 3.5
Sample C Male 4.6
Sample D Male 4.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 74.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.7
Samples: 4

Max nTPM: 81.4
Min nTPM: 68.7
Sample A Male 79.3
Sample B Male 81.4
Sample C Female 68.7
Sample D Female 69.3
Hippocampal formation
nTPM: 73.3
Samples: 4

Max nTPM: 80.9
Min nTPM: 64.5
Sample A Male 78.7
Sample B Male 68.9
Sample C Female 64.5
Sample D Female 80.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.5
75259440 Antisense, RP_051214_02_B10, Mouse strain C57BL/6J (56 days, male) 8.5
75259494 Antisense, RP_051214_02_B10, Mouse strain C57BL/6J (56 days, male) 8.4
75692765 Antisense, RP_051214_02_B10, Mouse strain C57BL/6J (56 days, male) 8.3

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