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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
49.4
nTPM
GTEx:
49.4
nTPM
FANTOM5:
97.6
Scaled Tags Per Million
Pig:
65.7
nTPM
Mouse:
62.4
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
49.4
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 49.4
Samples: 105
Max nTPM: 119.2
Min nTPM: 6.3
Std nTPM: 22.7
Median nTPM: 0.0
218_1
71 years, female
119.2
352_1
62 years, male
101.3
356_1
87 years, female
99.0
350_1
84 years, female
87.0
354_1
81 years, female
85.1
351_1
91 years, male
82.5
506_1
65 years, male
81.3
319_1
81 years, male
81.1
293_1
68 years, female
80.6
243_1
75 years, male
79.9
452_1
88 years, female
78.7
163_1
78 years, male
78.6
353_1
82 years, female
76.5
394_1
75 years, female
76.5
320_1
89 years, female
76.4
355_1
70 years, female
75.2
376_1
75 years, female
75.0
177_1
74 years, male
73.4
237_1
82 years, male
72.8
347_1
72 years, male
71.3
377_1
82 years, female
69.6
172_1
72 years, female
69.1
322_1
76 years, male
68.8
379_1
60 years, male
68.5
317_1
60 years, male
68.2
99_1
64 years, male
67.9
335_1
73 years, female
67.5
386_1
76 years, male
67.0
447_1
81 years, male
66.7
349_1
83 years, male
65.9
318_1
68 years, male
65.3
321_1
62 years, female
64.7
292_1
71 years, male
63.7
173_1
67 years, male
63.6
295_1
61 years, female
60.4
375_1
74 years, female
59.6
503_1
68 years, male
59.3
251_1
78 years, male
57.8
41_1
94 years, female
56.7
406_1
79 years, male
56.1
286_1
68 years, female
54.6
264_1
73 years, female
54.0
404_1
82 years, female
54.0
425_1
59 years, female
53.5
316_1
62 years, male
53.3
189_1
76 years, male
52.9
384_1
83 years, male
52.7
291_1
76 years, male
51.8
517_1
88 years, male
50.5
389_1
86 years, female
50.3
246_1
77 years, male
49.6
266_1
85 years, male
47.8
348_1
84 years, male
47.8
480_1
63 years, male
46.3
405_1
91 years, male
45.8
526_1
61 years, male
44.7
311_1
78 years, male
43.6
17_1
71 years, male
42.6
35_1
74 years, female
42.0
4_1
88 years, female
41.8
396_1
62 years, male
41.2
229_1
69 years, female
41.0
42_1
85 years, male
40.4
137_1
83 years, male
40.1
217_1
76 years, male
39.7
2_1
77 years, female
39.4
6_1
73 years, female
39.1
120_1
70 years, female
38.6
153_1
70 years, female
38.1
115_1
83 years, male
37.6
313_1
79 years, female
37.2
265_1
87 years, male
37.1
9_1
66 years, female
34.7
468_1
89 years, male
34.4
254_1
77 years, female
34.1
499_1
55 years, female
33.9
117_1
61 years, male
33.6
145_1
84 years, male
33.5
109_1
81 years, female
33.0
307_1
66 years, female
32.8
518_1
75 years, female
32.7
126_1
63 years, male
32.3
324_1
76 years, male
30.8
288_1
66 years, female
30.5
314_1
67 years, male
30.0
18_1
88 years, male
29.6
315_1
62 years, female
29.5
81_1
67 years, male
29.1
308_1
70 years, female
24.1
139_1
64 years, female
22.9
142_1
61 years, female
22.6
119_1
70 years, female
22.1
162_1
79 years, female
20.3
495_1
57 years, female
19.7
415_1
77 years, female
19.4
32_1
67 years, male
18.1
466_1
57 years, female
17.2
43_1
64 years, female
17.1
501_1
88 years, male
15.5
414_1
84 years, female
15.2
89_1
63 years, male
14.4
149_1
88 years, male
11.8
490_1
67 years, female
11.6
413_1
59 years, female
9.3
491_1
89 years, female
6.3
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
