HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Medium
RNA expressioni
Consensus:212.7 nTPM
HPA Brain:403.4 nTPM
GTEx:212.7 nTPM
FANTOM5:224.7 Scaled Tags Per Million
Pig:112.5 nTPM
Mouse:94.4 nTPM
Allen mouse:5.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006881
Glial cells High
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 403.4
Sample id Sample description nTPM
Hippocampus
nTPM: 279.4
2529 Female, age 94, left hemisphere 410.1
1911 Female, age 85, right hemisphere 318.0
2621 Female, age 67, right hemisphere 303.7
1898 Male, age 80, left hemisphere 227.1
2148 Female, age 91, left hemisphere 225.5
1855 Male, age 76, left hemisphere 192.1
Dentate gyrus
nTPM: 288.0
2530 Female, age 94, left hemisphere 453.0
2010 Male, age 76, both hemispheres 320.6
2531 Female, age 67, both hemispheres 276.6
2246 Female, age 85, both hemispheres 255.6
2528 Male, age 74, both hemispheres 244.5
1927 Female, age 91, both hemispheres 177.6
Entorhinal gyrus
nTPM: 339.2
2117 Female, age 91, right hemisphere 443.2
2764 Male, age 80, right hemisphere 439.3
2686 Male, age 75, right hemisphere 339.4
2613 Female, age 94, left hemisphere 308.6
1938 Female, age 85, left hemisphere 256.9
1787 Male, age 76, left hemisphere 247.9
Hippocampus, CA1
nTPM: 224.4
2082 Female, age 91, right hemisphere 294.4
2527 Male, age 74, both hemispheres 247.2
2749 Male, age 80, left hemisphere 197.9
2045 Male, age 76, both hemispheres 196.4
1873 Female, age 85, both hemispheres 185.8
Hippocampus, CA2
nTPM: 305.6
2437 Female, age 94, left hemisphere 371.0
1963 Male, age 80, left hemisphere 358.6
2249 Male, age 74, both hemispheres 313.8
1940 Female, age 85, left hemisphere 311.8
2113 Female, age 91, right hemisphere 311.3
1892 Male, age 76, both hemispheres 167.2
Hippocampus, CA3
nTPM: 234.4
1891 Female, age 85, both hemispheres 361.3
1867 Male, age 76, both hemispheres 243.0
2861 Female, age 67, both hemispheres 214.5
2436 Male, age 74, both hemispheres 208.4
2620 Female, age 94, left hemisphere 194.2
2137 Male, age 80, left hemisphere 185.3
Parahippocampal cortex
nTPM: 284.9
2532 Female, age 72, left hemisphere 382.2
2018 Male, age 76, both hemispheres 368.2
2692 Male, age 74, both hemispheres 347.6
1990 Female, age 91, right hemisphere 335.1
1850 Male, age 80, both hemispheres 276.6
2245 Female, age 91, both hemispheres 269.5
2622 Female, age 67, right hemisphere 244.2
1933 Female, age 85, both hemispheres 232.1
2693 Female, age 94, both hemispheres 220.0
2250 Female, age 67, right hemisphere 173.3
Perirhinal gyrus
nTPM: 198.6
2848 Male, age 76, right hemisphere 237.3
1794 Male, age 80, right hemisphere 211.2
2521 Female, age 94, right hemisphere 202.6
1847 Female, age 91, left hemisphere 181.8
1841 Female, age 85, right hemisphere 159.9
Subiculum
nTPM: 403.4
2042 Male, age 76, both hemispheres 595.6
2438 Female, age 94, left hemisphere 463.9
1901 Male, age 80, both hemispheres 426.7
1977 Female, age 85, both hemispheres 379.3
2619 Male, age 74, both hemispheres 314.4
2729 Female, age 91, right hemisphere 240.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 212.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 212.7
Samples: 197

Max nTPM: 814.7
Min nTPM: 45.5
Std nTPM: 105.1
Median nTPM: 188.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 814.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 503.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 500.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 498.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 436.2
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 429.9
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 429.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 426.9
GTEX-1HGF4-0011-R1a-SM-CJI3S 60-69 years, male 410.3
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 410.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 408.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 224.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 224.7
FF:10153-102I9 76 years, female 311.3
FF:10169-103B7 60 years, female 138.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 112.5
Pig sample Sample description nTPM
Subiculum
nTPM: 64.5
Samples: 4

Max nTPM: 73.0
Min nTPM: 56.7
Sample A Female 73.0
Sample B Female 70.5
Sample C Male 57.6
Sample D Male 56.7
Dorsal hippocampus
nTPM: 112.5
Samples: 4

Max nTPM: 183.4
Min nTPM: 34.4
Sample A Female 183.4
Sample B Female 85.0
Sample C Male 147.2
Sample D Male 34.4
Entorhinal cortex
nTPM: 55.1
Samples: 4

Max nTPM: 62.3
Min nTPM: 46.2
Sample A Female 58.5
Sample B Female 62.3
Sample C Male 53.2
Sample D Male 46.2
Ventral hippocampus
nTPM: 79.7
Samples: 4

Max nTPM: 96.9
Min nTPM: 49.3
Sample A Female 96.9
Sample B Female 49.3
Sample C Male 89.6
Sample D Male 82.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 94.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 59.9
Samples: 4

Max nTPM: 72.1
Min nTPM: 43.6
Sample A Male 72.1
Sample B Male 55.8
Sample C Female 68.0
Sample D Female 43.6
Hippocampal formation
nTPM: 94.5
Samples: 4

Max nTPM: 113.5
Min nTPM: 80.2
Sample A Male 80.2
Sample B Male 90.7
Sample C Female 113.5
Sample D Female 93.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.8
70429303 Antisense, RP_050614_01_D08, Mouse strain C57BL/6J (56 days, male) 5.8

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