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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
862.1
nTPM
FANTOM5:
686.9
Scaled Tags Per Million
Pig:
165.3
nTPM
Allen mouse:
7.9
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
862.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 825.7
2301
Female, age 85, both hemispheres
1108.4
2188
Female, age 91, both hemispheres
1009.2
2090
Male, age 80, both hemispheres
792.7
1984
Male, age 76, both hemispheres
392.3
Dorsal cochlear nucleus nTPM: 648.8
2187
Female, age 91, both hemispheres
892.0
2378
Male, age 80, both hemispheres
665.1
2802
Male, age 74, right hemisphere
654.7
2370
Male, age 61, both hemispheres
546.4
2058
Male, age 76, both hemispheres
486.1
Dorsal tegmental nucleus nTPM: 689.8
2083
Male, age 80, both hemispheres
853.2
2326
Male, age 74, both hemispheres
676.1
2358
Male, age 61, both hemispheres
663.5
1936
Male, age 76, left hemisphere
566.6
Dorsolateral tegmental area nTPM: 691.3
2751
Female, age 85, both hemispheres
888.4
2337
Male, age 61, both hemispheres
881.7
2654
Male, age 80, both hemispheres
878.3
2360
Male, age 74, both hemispheres
445.3
2141
Male, age 76, both hemispheres
362.6
Kolliker-Fuse nucleus nTPM: 856.2
2793
Female, age 91, left hemisphere
1245.9
2163
Male, age 80, both hemispheres
713.6
2315
Male, age 76, right hemisphere
609.0
Lateral lemniscal nuclei nTPM: 763.7
2320
Female, age 91, left hemisphere
1008.6
2036
Male, age 80, both hemispheres
808.5
2746
Female, age 85, left hemisphere
710.5
2453
Male, age 74, right hemisphere
696.0
2169
Male, age 76, both hemispheres
594.9
Lateral parabrachial nucleus nTPM: 747.5
2792
Male, age 76, both hemispheres
1116.7
2013
Male, age 80, both hemispheres
734.1
2790
Male, age 61, both hemispheres
653.5
2139
Female, age 85, right hemisphere
485.7
Lateral vestibular nucleus nTPM: 735.3
2311
Male, age 80, both hemispheres
780.0
2184
Male, age 76, both hemispheres
690.6
Locus coeruleus nTPM: 377.8
2720
Male, age 74, both hemispheres
524.1
2162
Male, age 80, both hemispheres
509.7
2317
Female, age 72, unknown
389.4
2123
Female, age 91, both hemispheres
354.4
2014
Male, age 55, unknown
346.6
1980
Male, age 76, both hemispheres
271.6
2788
Male, age 74, unknown
248.7
Medial parabrachial nucleus nTPM: 804.2
2170
Female, age 91, both hemispheres
993.1
2854
Male, age 80, both hemispheres
844.9
2463
Female, age 85, right hemisphere
844.6
2786
Male, age 76, both hemispheres
727.7
2156
Male, age 61, both hemispheres
610.5
Medial periolivary nuclei nTPM: 665.3
2458
Female, age 91, both hemispheres
899.6
2081
Male, age 80, both hemispheres
853.1
2791
Male, age 74, right hemisphere
571.6
2171
Female, age 85, both hemispheres
537.7
2063
Male, age 76, both hemispheres
464.6
Motor facial nucleus nTPM: 665.9
2697
Female, age 85, both hemispheres
861.7
2126
Male, age 61, both hemispheres
710.6
2795
Female, age 91, both hemispheres
696.3
2327
Male, age 80, both hemispheres
683.4
2365
Male, age 74, right hemisphere
634.2
2062
Male, age 76, both hemispheres
409.2
Motor trigeminal nucleus nTPM: 815.8
2321
Female, age 91, both hemispheres
1041.7
2560
Male, age 74, both hemispheres
912.8
2309
Male, age 76, both hemispheres
715.3
2335
Male, age 61, both hemispheres
707.7
2079
Male, age 80, both hemispheres
701.5
Nuclei of the trapezoid body nTPM: 612.7
2166
Male, age 80, both hemispheres
893.3
2368
Female, age 91, both hemispheres
768.8
2159
Male, age 61, both hemispheres
558.5
1983
Male, age 76, both hemispheres
427.5
2735
Female, age 85, both hemispheres
415.5
Nucleus raphe magnus nTPM: 640.7
2459
Female, age 91, both hemispheres
947.0
2328
Male, age 80, both hemispheres
773.0
2051
Male, age 76, both hemispheres
688.6
2172
Female, age 85, both hemispheres
542.7
2455
Male, age 74, both hemispheres
542.4
2160
Male, age 61, both hemispheres
350.6
Paramedian reticular nucleus nTPM: 655.8
2052
Male, age 76, both hemispheres
736.1
2050
Female, age 85, both hemispheres
718.8
2057
Male, age 80, both hemispheres
679.2
2313
Male, age 61, both hemispheres
489.0
Pedunculopontine tegmental nucleus nTPM: 609.2
2338
Male, age 61, both hemispheres
706.9
2334
Male, age 80, both hemispheres
666.8
1921
Female, age 85, both hemispheres
454.0
Pontine nuclei nTPM: 749.4
2454
Male, age 74, left hemisphere
985.6
2319
Female, age 91, both hemispheres
963.4
2787
Female, age 85, both hemispheres
858.7
2115
Male, age 80, left hemisphere
790.9
1968
Male, age 76, left hemisphere
693.5
2109
Female, age 72, unknown
673.0
1863
Male, age 55, unknown
608.6
2727
Male, age 61, right hemisphere
421.6
Pontine raphe nucleus nTPM: 549.4
2122
Female, age 85, midline
639.2
2853
Male, age 76, midline
459.7
Posteroventral cochlear nucleus nTPM: 737.2
2135
Female, age 91, both hemispheres
994.2
2341
Male, age 80, both hemispheres
834.7
2371
Male, age 61, both hemispheres
674.1
2070
Male, age 76, both hemispheres
616.7
2752
Female, age 85, both hemispheres
566.1
Principal sensory trigeminal nucleus nTPM: 665.0
2367
Female, age 91, left hemisphere
1000.0
2324
Male, age 76, both hemispheres
645.4
2008
Male, age 80, left hemisphere
612.9
2158
Male, age 61, both hemispheres
401.7
Reticular pontine nucleus, caudal nTPM: 838.0
2457
Female, age 91, both hemispheres
965.7
2559
Male, age 74, both hemispheres
880.9
2332
Male, age 80, right hemisphere
825.9
2092
Male, age 76, both hemispheres
679.6
Reticular pontine nucleus, oral nTPM: 862.1
2366
Female, age 91, both hemispheres
1110.0
2361
Male, age 74, both hemispheres
867.3
1939
Male, age 80, both hemispheres
818.8
2167
Male, age 76, both hemispheres
764.9
2012
Female, age 85, both hemispheres
749.4
Reticulotegmental nucleus nTPM: 731.1
2322
Female, age 91, both hemispheres
854.1
2452
Male, age 74, both hemispheres
807.3
2333
Male, age 80, both hemispheres
777.0
2325
Male, age 76, both hemispheres
485.9
Spinal trigeminal nucleus, oral nTPM: 583.1
2164
Male, age 80, both hemispheres
786.1
1978
Male, age 76, both hemispheres
486.4
2737
Female, age 85, both hemispheres
476.8
Subcoeruleus area nTPM: 687.0
2369
Female, age 85, left hemisphere
1031.9
2089
Male, age 76, left hemisphere
685.0
1958
Male, age 80, both hemispheres
641.1
2451
Male, age 74, both hemispheres
575.5
2323
Female, age 91, left hemisphere
501.6
Superior olive nTPM: 740.6
2561
Female, age 91, both hemispheres
880.2
2329
Male, age 80, right hemisphere
866.6
2020
Male, age 76, both hemispheres
782.1
1875
Female, age 85, both hemispheres
599.7
2364
Male, age 74, right hemisphere
574.3
Ventral periolivary nuclei nTPM: 658.8
2023
Male, age 76, both hemispheres
862.1
2794
Female, age 91, left hemisphere
679.2
2165
Male, age 80, both hemispheres
668.9
2130
Female, age 85, both hemispheres
424.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 754.8
2456
Female, age 91, both hemispheres
921.7
2840
Female, age 85, both hemispheres
851.3
2161
Male, age 80, both hemispheres
756.1
2359
Male, age 61, both hemispheres
678.2
2449
Male, age 74, both hemispheres
671.7
1959
Male, age 76, both hemispheres
649.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
165.3
Pig sample
Sample description
nTPM
Pons nTPM: 165.3
Samples: 4
Max nTPM: 223.8
Min nTPM: 129.9
Sample A
Female
156.6
Sample B
Female
129.9
Sample C
Male
150.8
Sample D
Male
223.8
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
