HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.6 nTPM
HPA Brain:42.9 nTPM
GTEx:18.6 nTPM
FANTOM5:90.5 Scaled Tags Per Million
Pig:26.2 nTPM
Mouse:44.8 nTPM
Allen mouse:7.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA047911
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 42.9
Sample id Sample description nTPM
Hippocampus
nTPM: 37.5
2621 Female, age 67, right hemisphere 44.1
2148 Female, age 91, left hemisphere 40.5
1855 Male, age 76, left hemisphere 38.1
1911 Female, age 85, right hemisphere 35.5
1898 Male, age 80, left hemisphere 35.4
2529 Female, age 94, left hemisphere 31.8
Dentate gyrus
nTPM: 40.2
2531 Female, age 67, both hemispheres 43.7
1927 Female, age 91, both hemispheres 42.9
2010 Male, age 76, both hemispheres 41.6
2528 Male, age 74, both hemispheres 39.1
2246 Female, age 85, both hemispheres 37.2
2530 Female, age 94, left hemisphere 36.8
Entorhinal gyrus
nTPM: 34.2
2117 Female, age 91, right hemisphere 35.3
2764 Male, age 80, right hemisphere 34.4
1938 Female, age 85, left hemisphere 34.3
2613 Female, age 94, left hemisphere 34.2
1787 Male, age 76, left hemisphere 33.8
2686 Male, age 75, right hemisphere 33.2
Hippocampus, CA1
nTPM: 42.9
2045 Male, age 76, both hemispheres 45.8
2749 Male, age 80, left hemisphere 43.5
1873 Female, age 85, both hemispheres 43.3
2082 Female, age 91, right hemisphere 42.9
2527 Male, age 74, both hemispheres 38.8
Hippocampus, CA2
nTPM: 38.1
1892 Male, age 76, both hemispheres 44.5
1963 Male, age 80, left hemisphere 40.8
2113 Female, age 91, right hemisphere 37.7
2249 Male, age 74, both hemispheres 35.5
2437 Female, age 94, left hemisphere 35.2
1940 Female, age 85, left hemisphere 34.9
Hippocampus, CA3
nTPM: 40.6
2620 Female, age 94, left hemisphere 47.2
2137 Male, age 80, left hemisphere 43.2
2861 Female, age 67, both hemispheres 40.5
1867 Male, age 76, both hemispheres 38.7
1891 Female, age 85, both hemispheres 38.2
2436 Male, age 74, both hemispheres 35.9
Parahippocampal cortex
nTPM: 36.9
2693 Female, age 94, both hemispheres 45.3
2018 Male, age 76, both hemispheres 42.4
2692 Male, age 74, both hemispheres 38.2
2532 Female, age 72, left hemisphere 36.2
2250 Female, age 67, right hemisphere 35.6
1990 Female, age 91, right hemisphere 35.2
1933 Female, age 85, both hemispheres 34.6
1850 Male, age 80, both hemispheres 34.3
2622 Female, age 67, right hemisphere 33.7
2245 Female, age 91, both hemispheres 33.3
Perirhinal gyrus
nTPM: 37.3
2848 Male, age 76, right hemisphere 38.7
1847 Female, age 91, left hemisphere 38.1
2521 Female, age 94, right hemisphere 38.1
1841 Female, age 85, right hemisphere 37.5
1794 Male, age 80, right hemisphere 34.0
Subiculum
nTPM: 33.9
2729 Female, age 91, right hemisphere 41.6
1977 Female, age 85, both hemispheres 35.6
1901 Male, age 80, both hemispheres 35.3
2619 Male, age 74, both hemispheres 32.2
2042 Male, age 76, both hemispheres 32.1
2438 Female, age 94, left hemisphere 26.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.6
Samples: 197

Max nTPM: 34.8
Min nTPM: 11.9
Std nTPM: 3.5
Median nTPM: 18.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 34.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 30.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 28.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 28.5
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 27.4
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 27.0
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 27.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 26.4
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.1
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 26.0
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 25.3
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 90.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 90.5
FF:10169-103B7 60 years, female 115.2
FF:10153-102I9 76 years, female 65.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 26.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.5
Samples: 4

Max nTPM: 26.1
Min nTPM: 20.6
Sample A Female 26.1
Sample B Female 21.6
Sample C Male 21.7
Sample D Male 20.6
Dorsal hippocampus
nTPM: 26.2
Samples: 4

Max nTPM: 30.1
Min nTPM: 21.8
Sample A Female 30.1
Sample B Female 27.0
Sample C Male 26.0
Sample D Male 21.8
Entorhinal cortex
nTPM: 21.2
Samples: 4

Max nTPM: 24.9
Min nTPM: 17.7
Sample A Female 20.3
Sample B Female 24.9
Sample C Male 22.0
Sample D Male 17.7
Ventral hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 27.8
Min nTPM: 22.4
Sample A Female 27.8
Sample B Female 22.4
Sample C Male 23.5
Sample D Male 24.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.7
Samples: 4

Max nTPM: 48.4
Min nTPM: 41.0
Sample A Male 43.5
Sample B Male 45.9
Sample C Female 41.0
Sample D Female 48.4
Hippocampal formation
nTPM: 44.8
Samples: 4

Max nTPM: 48.7
Min nTPM: 41.7
Sample A Male 41.7
Sample B Male 45.0
Sample C Female 48.7
Sample D Female 43.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 7.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 7.6
2373 Antisense, RP_040420_01_A03, Mouse strain C57BL/6J (56 days, male) 7.6
2374 Antisense, RP_040420_01_A03, Mouse strain C57BL/6J (56 days, male) 5.5

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org