HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:55.9 nTPM
HPA Brain:49.5 nTPM
GTEx:55.9 nTPM
FANTOM5:139.9 Scaled Tags Per Million
Pig:54.1 nTPM
Mouse:77.1 nTPM
Allen mouse:4.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024049Antibody HPA024558
Glial cells Not detectedNot detected
Neuronal cells Not detectedLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 49.5
Sample id Sample description nTPM
Hippocampus
nTPM: 46.7
1898 Male, age 80, left hemisphere 55.1
1855 Male, age 76, left hemisphere 50.8
1911 Female, age 85, right hemisphere 48.7
2529 Female, age 94, left hemisphere 48.1
2621 Female, age 67, right hemisphere 42.9
2148 Female, age 91, left hemisphere 34.6
Dentate gyrus
nTPM: 43.6
1927 Female, age 91, both hemispheres 53.2
2010 Male, age 76, both hemispheres 48.9
2246 Female, age 85, both hemispheres 43.4
2528 Male, age 74, both hemispheres 43.0
2530 Female, age 94, left hemisphere 41.8
2531 Female, age 67, both hemispheres 30.9
Entorhinal gyrus
nTPM: 39.3
1938 Female, age 85, left hemisphere 49.6
2117 Female, age 91, right hemisphere 42.4
1787 Male, age 76, left hemisphere 40.8
2764 Male, age 80, right hemisphere 38.8
2613 Female, age 94, left hemisphere 32.8
2686 Male, age 75, right hemisphere 31.1
Hippocampus, CA1
nTPM: 49.5
2749 Male, age 80, left hemisphere 65.2
2527 Male, age 74, both hemispheres 53.9
1873 Female, age 85, both hemispheres 51.6
2045 Male, age 76, both hemispheres 40.5
2082 Female, age 91, right hemisphere 36.3
Hippocampus, CA2
nTPM: 48.3
1892 Male, age 76, both hemispheres 59.1
1963 Male, age 80, left hemisphere 55.7
2249 Male, age 74, both hemispheres 51.2
2437 Female, age 94, left hemisphere 42.9
1940 Female, age 85, left hemisphere 40.7
2113 Female, age 91, right hemisphere 40.3
Hippocampus, CA3
nTPM: 46.4
2137 Male, age 80, left hemisphere 62.6
1891 Female, age 85, both hemispheres 50.6
1867 Male, age 76, both hemispheres 50.1
2436 Male, age 74, both hemispheres 48.8
2620 Female, age 94, left hemisphere 36.3
2861 Female, age 67, both hemispheres 30.1
Parahippocampal cortex
nTPM: 44.3
1850 Male, age 80, both hemispheres 53.5
2250 Female, age 67, right hemisphere 48.9
1933 Female, age 85, both hemispheres 48.1
2018 Male, age 76, both hemispheres 46.4
1990 Female, age 91, right hemisphere 45.9
2693 Female, age 94, both hemispheres 44.5
2245 Female, age 91, both hemispheres 43.8
2532 Female, age 72, left hemisphere 42.8
2692 Male, age 74, both hemispheres 37.9
2622 Female, age 67, right hemisphere 30.8
Perirhinal gyrus
nTPM: 49.4
1841 Female, age 85, right hemisphere 54.9
1847 Female, age 91, left hemisphere 51.4
1794 Male, age 80, right hemisphere 51.3
2848 Male, age 76, right hemisphere 45.7
2521 Female, age 94, right hemisphere 43.7
Subiculum
nTPM: 45.9
1901 Male, age 80, both hemispheres 53.1
2438 Female, age 94, left hemisphere 52.9
2042 Male, age 76, both hemispheres 45.4
1977 Female, age 85, both hemispheres 43.8
2619 Male, age 74, both hemispheres 40.1
2729 Female, age 91, right hemisphere 40.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 55.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 55.9
Samples: 197

Max nTPM: 149.3
Min nTPM: 33.3
Std nTPM: 12.8
Median nTPM: 54.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 149.3
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 101.6
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 99.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 96.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 80.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 76.9
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 76.7
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 75.4
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 74.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 73.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 73.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 139.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 139.9
FF:10169-103B7 60 years, female 158.9
FF:10153-102I9 76 years, female 121.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 54.1
Pig sample Sample description nTPM
Subiculum
nTPM: 50.0
Samples: 4

Max nTPM: 63.9
Min nTPM: 42.7
Sample A Female 63.9
Sample B Female 47.0
Sample C Male 42.7
Sample D Male 46.5
Dorsal hippocampus
nTPM: 53.4
Samples: 4

Max nTPM: 73.7
Min nTPM: 41.3
Sample A Female 73.7
Sample B Female 52.8
Sample C Male 45.7
Sample D Male 41.3
Entorhinal cortex
nTPM: 54.1
Samples: 4

Max nTPM: 69.1
Min nTPM: 41.1
Sample A Female 54.7
Sample B Female 69.1
Sample C Male 51.4
Sample D Male 41.1
Ventral hippocampus
nTPM: 47.9
Samples: 4

Max nTPM: 58.0
Min nTPM: 42.5
Sample A Female 58.0
Sample B Female 42.5
Sample C Male 47.3
Sample D Male 43.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 77.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 70.1
Samples: 4

Max nTPM: 78.2
Min nTPM: 66.6
Sample A Male 68.6
Sample B Male 78.2
Sample C Female 66.6
Sample D Female 66.8
Hippocampal formation
nTPM: 77.1
Samples: 4

Max nTPM: 86.0
Min nTPM: 68.3
Sample A Male 86.0
Sample B Male 73.3
Sample C Female 68.3
Sample D Female 80.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.2
323597 Antisense, RP_040609_01_H01, Mouse strain C57BL/6J (56 days, male) 6.1
68203507 Antisense, RP_041208_01_E03, Mouse strain C57BL/6J (56 days, male) 2.4

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