HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:293.2 nTPM
HPA Brain:330.9 nTPM
GTEx:293.2 nTPM
FANTOM5:194.1 Scaled Tags Per Million
Pig:238.1 nTPM
Mouse:517.1 nTPM
Allen mouse:16.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 330.9
Sample id Sample description nTPM
Hippocampus
nTPM: 271.9
1898 Male, age 80, left hemisphere 365.3
1855 Male, age 76, left hemisphere 278.8
2621 Female, age 67, right hemisphere 277.5
2148 Female, age 91, left hemisphere 258.5
1911 Female, age 85, right hemisphere 245.2
2529 Female, age 94, left hemisphere 206.3
Dentate gyrus
nTPM: 289.1
1927 Female, age 91, both hemispheres 373.9
2530 Female, age 94, left hemisphere 355.2
2010 Male, age 76, both hemispheres 297.4
2531 Female, age 67, both hemispheres 252.8
2246 Female, age 85, both hemispheres 231.8
2528 Male, age 74, both hemispheres 223.7
Entorhinal gyrus
nTPM: 262.2
2613 Female, age 94, left hemisphere 360.5
2764 Male, age 80, right hemisphere 281.4
1938 Female, age 85, left hemisphere 281.2
1787 Male, age 76, left hemisphere 237.4
2686 Male, age 75, right hemisphere 216.9
2117 Female, age 91, right hemisphere 195.8
Hippocampus, CA1
nTPM: 330.9
2749 Male, age 80, left hemisphere 607.7
1873 Female, age 85, both hemispheres 310.7
2045 Male, age 76, both hemispheres 261.5
2527 Male, age 74, both hemispheres 240.8
2082 Female, age 91, right hemisphere 233.8
Hippocampus, CA2
nTPM: 280.2
1963 Male, age 80, left hemisphere 397.9
1892 Male, age 76, both hemispheres 339.3
2437 Female, age 94, left hemisphere 275.6
2249 Male, age 74, both hemispheres 224.9
2113 Female, age 91, right hemisphere 222.5
1940 Female, age 85, left hemisphere 221.1
Hippocampus, CA3
nTPM: 302.0
2137 Male, age 80, left hemisphere 470.4
2620 Female, age 94, left hemisphere 328.1
1867 Male, age 76, both hemispheres 285.8
2861 Female, age 67, both hemispheres 276.1
2436 Male, age 74, both hemispheres 230.8
1891 Female, age 85, both hemispheres 221.0
Parahippocampal cortex
nTPM: 231.9
1850 Male, age 80, both hemispheres 271.4
1990 Female, age 91, right hemisphere 256.7
2245 Female, age 91, both hemispheres 247.4
1933 Female, age 85, both hemispheres 246.1
2693 Female, age 94, both hemispheres 233.9
2622 Female, age 67, right hemisphere 222.4
2250 Female, age 67, right hemisphere 217.1
2018 Male, age 76, both hemispheres 209.9
2692 Male, age 74, both hemispheres 208.5
2532 Female, age 72, left hemisphere 205.4
Perirhinal gyrus
nTPM: 272.4
1847 Female, age 91, left hemisphere 349.8
1794 Male, age 80, right hemisphere 294.7
1841 Female, age 85, right hemisphere 261.5
2521 Female, age 94, right hemisphere 255.3
2848 Male, age 76, right hemisphere 200.7
Subiculum
nTPM: 229.1
1901 Male, age 80, both hemispheres 302.3
1977 Female, age 85, both hemispheres 251.8
2042 Male, age 76, both hemispheres 217.1
2619 Male, age 74, both hemispheres 207.4
2438 Female, age 94, left hemisphere 198.3
2729 Female, age 91, right hemisphere 197.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 293.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 293.2
Samples: 197

Max nTPM: 817.0
Min nTPM: 83.5
Std nTPM: 127.9
Median nTPM: 273.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 817.0
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 598.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 587.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 579.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 577.7
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 562.5
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 548.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 531.6
GTEX-1B8SF-0011-R1b-SM-7P8Q8 60-69 years, male 518.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 510.8
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 508.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 194.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 194.1
FF:10169-103B7 60 years, female 256.5
FF:10153-102I9 76 years, female 131.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 238.1
Pig sample Sample description nTPM
Subiculum
nTPM: 190.1
Samples: 4

Max nTPM: 231.7
Min nTPM: 164.0
Sample A Female 231.7
Sample B Female 179.1
Sample C Male 185.5
Sample D Male 164.0
Dorsal hippocampus
nTPM: 226.7
Samples: 4

Max nTPM: 309.6
Min nTPM: 169.8
Sample A Female 309.6
Sample B Female 246.6
Sample C Male 180.6
Sample D Male 169.8
Entorhinal cortex
nTPM: 198.2
Samples: 4

Max nTPM: 216.6
Min nTPM: 178.9
Sample A Female 216.6
Sample B Female 189.2
Sample C Male 208.1
Sample D Male 178.9
Ventral hippocampus
nTPM: 238.1
Samples: 4

Max nTPM: 281.0
Min nTPM: 159.3
Sample A Female 262.8
Sample B Female 159.3
Sample C Male 281.0
Sample D Male 249.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 517.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 469.3
Samples: 4

Max nTPM: 553.3
Min nTPM: 435.1
Sample A Male 441.2
Sample B Male 435.1
Sample C Female 447.5
Sample D Female 553.3
Hippocampal formation
nTPM: 517.2
Samples: 4

Max nTPM: 567.6
Min nTPM: 490.0
Sample A Male 510.0
Sample B Male 501.0
Sample C Female 567.6
Sample D Female 490.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.2
68667946 Antisense, RP_050203_01_B05, Mouse strain C57BL/6J (56 days, male) 16.2

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