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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
254.2
nTPM
FANTOM5:
287.6
Scaled Tags Per Million
Pig:
208.6
nTPM
Allen mouse:
12.0
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
254.2
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 157.0
1984
Male, age 76, both hemispheres
183.9
2301
Female, age 85, both hemispheres
152.9
2188
Female, age 91, both hemispheres
149.5
2090
Male, age 80, both hemispheres
141.8
Dorsal cochlear nucleus nTPM: 170.0
2058
Male, age 76, both hemispheres
190.7
2802
Male, age 74, right hemisphere
188.7
2370
Male, age 61, both hemispheres
177.4
2187
Female, age 91, both hemispheres
162.5
2378
Male, age 80, both hemispheres
130.5
Dorsal tegmental nucleus nTPM: 168.6
2083
Male, age 80, both hemispheres
182.0
2358
Male, age 61, both hemispheres
169.8
1936
Male, age 76, left hemisphere
168.4
2326
Male, age 74, both hemispheres
154.3
Dorsolateral tegmental area nTPM: 166.6
2141
Male, age 76, both hemispheres
182.6
2654
Male, age 80, both hemispheres
177.6
2751
Female, age 85, both hemispheres
176.4
2360
Male, age 74, both hemispheres
156.5
2337
Male, age 61, both hemispheres
140.0
Kolliker-Fuse nucleus nTPM: 180.2
2163
Male, age 80, both hemispheres
210.0
2793
Female, age 91, left hemisphere
166.6
2315
Male, age 76, right hemisphere
164.0
Lateral lemniscal nuclei nTPM: 224.4
2036
Male, age 80, both hemispheres
262.3
2169
Male, age 76, both hemispheres
236.7
2746
Female, age 85, left hemisphere
236.5
2453
Male, age 74, right hemisphere
225.2
2320
Female, age 91, left hemisphere
161.5
Lateral parabrachial nucleus nTPM: 195.5
2139
Female, age 85, right hemisphere
256.6
2790
Male, age 61, both hemispheres
216.7
2013
Male, age 80, both hemispheres
186.0
2792
Male, age 76, both hemispheres
122.5
Lateral vestibular nucleus nTPM: 184.6
2184
Male, age 76, both hemispheres
210.7
2311
Male, age 80, both hemispheres
158.5
Locus coeruleus nTPM: 254.2
2014
Male, age 55, unknown
305.6
2123
Female, age 91, both hemispheres
294.5
2317
Female, age 72, unknown
262.9
1980
Male, age 76, both hemispheres
260.5
2720
Male, age 74, both hemispheres
253.7
2162
Male, age 80, both hemispheres
202.5
2788
Male, age 74, unknown
199.4
Medial parabrachial nucleus nTPM: 186.9
2156
Male, age 61, both hemispheres
220.1
2463
Female, age 85, right hemisphere
190.4
2170
Female, age 91, both hemispheres
188.8
2854
Male, age 80, both hemispheres
171.1
2786
Male, age 76, both hemispheres
164.1
Medial periolivary nuclei nTPM: 219.0
2171
Female, age 85, both hemispheres
287.3
2063
Male, age 76, both hemispheres
280.3
2791
Male, age 74, right hemisphere
206.6
2081
Male, age 80, both hemispheres
168.8
2458
Female, age 91, both hemispheres
151.8
Motor facial nucleus nTPM: 216.5
2062
Male, age 76, both hemispheres
304.3
2365
Male, age 74, right hemisphere
219.8
2795
Female, age 91, both hemispheres
200.1
2327
Male, age 80, both hemispheres
198.5
2126
Male, age 61, both hemispheres
195.2
2697
Female, age 85, both hemispheres
181.2
Motor trigeminal nucleus nTPM: 188.9
2079
Male, age 80, both hemispheres
217.7
2560
Male, age 74, both hemispheres
213.3
2335
Male, age 61, both hemispheres
187.1
2309
Male, age 76, both hemispheres
168.8
2321
Female, age 91, both hemispheres
157.8
Nuclei of the trapezoid body nTPM: 252.4
2735
Female, age 85, both hemispheres
314.4
2159
Male, age 61, both hemispheres
298.5
1983
Male, age 76, both hemispheres
278.0
2166
Male, age 80, both hemispheres
190.5
2368
Female, age 91, both hemispheres
180.8
Nucleus raphe magnus nTPM: 244.1
2160
Male, age 61, both hemispheres
330.5
2172
Female, age 85, both hemispheres
304.2
2455
Male, age 74, both hemispheres
228.3
2051
Male, age 76, both hemispheres
223.1
2328
Male, age 80, both hemispheres
199.6
2459
Female, age 91, both hemispheres
179.1
Paramedian reticular nucleus nTPM: 206.4
2050
Female, age 85, both hemispheres
243.4
2313
Male, age 61, both hemispheres
231.8
2057
Male, age 80, both hemispheres
217.1
2052
Male, age 76, both hemispheres
133.3
Pedunculopontine tegmental nucleus nTPM: 174.3
1921
Female, age 85, both hemispheres
193.5
2334
Male, age 80, both hemispheres
182.2
2338
Male, age 61, both hemispheres
147.2
Pontine nuclei nTPM: 252.1
2787
Female, age 85, both hemispheres
359.6
1863
Male, age 55, unknown
316.9
2727
Male, age 61, right hemisphere
310.3
2109
Female, age 72, unknown
258.9
1968
Male, age 76, left hemisphere
255.4
2454
Male, age 74, left hemisphere
180.7
2115
Male, age 80, left hemisphere
177.4
2319
Female, age 91, both hemispheres
157.6
Pontine raphe nucleus nTPM: 231.2
2122
Female, age 85, midline
262.6
2853
Male, age 76, midline
199.9
Posteroventral cochlear nucleus nTPM: 166.2
2752
Female, age 85, both hemispheres
220.7
2371
Male, age 61, both hemispheres
184.7
2070
Male, age 76, both hemispheres
177.3
2341
Male, age 80, both hemispheres
125.3
2135
Female, age 91, both hemispheres
123.1
Principal sensory trigeminal nucleus nTPM: 221.8
2158
Male, age 61, both hemispheres
302.2
2008
Male, age 80, left hemisphere
237.7
2324
Male, age 76, both hemispheres
186.1
2367
Female, age 91, left hemisphere
161.1
Reticular pontine nucleus, caudal nTPM: 192.1
2332
Male, age 80, right hemisphere
223.0
2092
Male, age 76, both hemispheres
214.7
2559
Male, age 74, both hemispheres
168.9
2457
Female, age 91, both hemispheres
161.8
Reticular pontine nucleus, oral nTPM: 181.4
2012
Female, age 85, both hemispheres
227.7
2361
Male, age 74, both hemispheres
183.5
1939
Male, age 80, both hemispheres
179.5
2167
Male, age 76, both hemispheres
166.5
2366
Female, age 91, both hemispheres
149.6
Reticulotegmental nucleus nTPM: 186.0
2325
Male, age 76, both hemispheres
213.1
2452
Male, age 74, both hemispheres
190.3
2333
Male, age 80, both hemispheres
175.7
2322
Female, age 91, both hemispheres
165.1
Spinal trigeminal nucleus, oral nTPM: 193.3
2737
Female, age 85, both hemispheres
209.4
2164
Male, age 80, both hemispheres
195.4
1978
Male, age 76, both hemispheres
175.3
Subcoeruleus area nTPM: 193.3
2089
Male, age 76, left hemisphere
213.1
2323
Female, age 91, left hemisphere
206.0
1958
Male, age 80, both hemispheres
202.9
2451
Male, age 74, both hemispheres
187.4
2369
Female, age 85, left hemisphere
156.9
Superior olive nTPM: 213.8
1875
Female, age 85, both hemispheres
274.6
2020
Male, age 76, both hemispheres
216.4
2364
Male, age 74, right hemisphere
198.1
2329
Male, age 80, right hemisphere
190.7
2561
Female, age 91, both hemispheres
189.2
Ventral periolivary nuclei nTPM: 220.8
2130
Female, age 85, both hemispheres
256.2
2165
Male, age 80, both hemispheres
237.1
2023
Male, age 76, both hemispheres
201.6
2794
Female, age 91, left hemisphere
188.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 195.6
2449
Male, age 74, both hemispheres
220.1
1959
Male, age 76, both hemispheres
217.6
2359
Male, age 61, both hemispheres
202.5
2161
Male, age 80, both hemispheres
189.9
2840
Female, age 85, both hemispheres
177.1
2456
Female, age 91, both hemispheres
166.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
208.6
Pig sample
Sample description
nTPM
Pons nTPM: 208.6
Samples: 4
Max nTPM: 338.4
Min nTPM: 153.0
Sample A
Female
338.4
Sample B
Female
153.0
Sample C
Male
163.1
Sample D
Male
179.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
