HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:29.1 nTPM
HPA Brain:125.6 nTPM
GTEx:29.1 nTPM
FANTOM5:63.1 Scaled Tags Per Million
Pig:77.0 nTPM
Mouse:52.0 nTPM
Allen mouse:8.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA022035Antibody HPA063619
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 125.6
Sample id Sample description nTPM
Hippocampus
nTPM: 110.3
2621 Female, age 67, right hemisphere 156.0
2148 Female, age 91, left hemisphere 123.9
2529 Female, age 94, left hemisphere 111.8
1855 Male, age 76, left hemisphere 107.3
1911 Female, age 85, right hemisphere 85.0
1898 Male, age 80, left hemisphere 78.0
Dentate gyrus
nTPM: 107.9
2531 Female, age 67, both hemispheres 205.8
2246 Female, age 85, both hemispheres 98.5
1927 Female, age 91, both hemispheres 91.3
2530 Female, age 94, left hemisphere 89.5
2528 Male, age 74, both hemispheres 82.9
2010 Male, age 76, both hemispheres 79.1
Entorhinal gyrus
nTPM: 96.7
2613 Female, age 94, left hemisphere 125.5
2686 Male, age 75, right hemisphere 115.0
2764 Male, age 80, right hemisphere 95.6
1787 Male, age 76, left hemisphere 87.0
1938 Female, age 85, left hemisphere 83.6
2117 Female, age 91, right hemisphere 73.3
Hippocampus, CA1
nTPM: 97.6
2045 Male, age 76, both hemispheres 129.7
2527 Male, age 74, both hemispheres 93.8
1873 Female, age 85, both hemispheres 92.6
2082 Female, age 91, right hemisphere 91.9
2749 Male, age 80, left hemisphere 80.0
Hippocampus, CA2
nTPM: 77.5
2113 Female, age 91, right hemisphere 100.6
1940 Female, age 85, left hemisphere 82.8
1892 Male, age 76, both hemispheres 79.2
2437 Female, age 94, left hemisphere 74.3
1963 Male, age 80, left hemisphere 71.3
2249 Male, age 74, both hemispheres 56.9
Hippocampus, CA3
nTPM: 125.6
2620 Female, age 94, left hemisphere 228.7
2861 Female, age 67, both hemispheres 217.3
2137 Male, age 80, left hemisphere 105.6
1867 Male, age 76, both hemispheres 70.4
1891 Female, age 85, both hemispheres 69.5
2436 Male, age 74, both hemispheres 62.1
Parahippocampal cortex
nTPM: 99.1
2622 Female, age 67, right hemisphere 155.0
2245 Female, age 91, both hemispheres 144.7
2693 Female, age 94, both hemispheres 102.9
2532 Female, age 72, left hemisphere 100.3
1850 Male, age 80, both hemispheres 89.8
2018 Male, age 76, both hemispheres 85.5
1933 Female, age 85, both hemispheres 83.0
2250 Female, age 67, right hemisphere 83.0
2692 Male, age 74, both hemispheres 77.3
1990 Female, age 91, right hemisphere 69.3
Perirhinal gyrus
nTPM: 102.7
1794 Male, age 80, right hemisphere 116.9
2848 Male, age 76, right hemisphere 113.8
1841 Female, age 85, right hemisphere 102.6
1847 Female, age 91, left hemisphere 93.5
2521 Female, age 94, right hemisphere 86.7
Subiculum
nTPM: 70.7
2729 Female, age 91, right hemisphere 91.7
2619 Male, age 74, both hemispheres 72.9
1977 Female, age 85, both hemispheres 69.1
2042 Male, age 76, both hemispheres 68.1
1901 Male, age 80, both hemispheres 64.3
2438 Female, age 94, left hemisphere 58.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 29.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 29.1
Samples: 197

Max nTPM: 72.3
Min nTPM: 5.7
Std nTPM: 14.2
Median nTPM: 26.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 72.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 72.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 67.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 65.8
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 65.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 62.7
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 61.8
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 59.3
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 57.7
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 57.6
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 57.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.1
FF:10169-103B7 60 years, female 66.4
FF:10153-102I9 76 years, female 59.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.0
Pig sample Sample description nTPM
Subiculum
nTPM: 40.8
Samples: 4

Max nTPM: 56.2
Min nTPM: 33.2
Sample A Female 56.2
Sample B Female 35.5
Sample C Male 38.4
Sample D Male 33.2
Dorsal hippocampus
nTPM: 77.0
Samples: 4

Max nTPM: 95.6
Min nTPM: 43.4
Sample A Female 90.1
Sample B Female 95.6
Sample C Male 43.4
Sample D Male 78.9
Entorhinal cortex
nTPM: 55.6
Samples: 4

Max nTPM: 63.4
Min nTPM: 48.6
Sample A Female 63.4
Sample B Female 48.6
Sample C Male 59.7
Sample D Male 50.7
Ventral hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 85.9
Min nTPM: 41.3
Sample A Female 41.3
Sample B Female 51.7
Sample C Male 55.3
Sample D Male 85.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 52.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 45.7
Samples: 4

Max nTPM: 49.1
Min nTPM: 43.4
Sample A Male 49.1
Sample B Male 43.4
Sample C Female 45.0
Sample D Female 45.4
Hippocampal formation
nTPM: 52.0
Samples: 4

Max nTPM: 54.9
Min nTPM: 47.8
Sample A Male 47.8
Sample B Male 54.9
Sample C Female 54.7
Sample D Female 50.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.3
69524515 Antisense, RP_050419_04_E04, Mouse strain C57BL/6J (56 days, male) 8.3
71250309 Antisense, RP_050419_04_E04, Mouse strain C57BL/6J (56 days, male) 8.2

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