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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
713.8
nTPM
FANTOM5:
481.7
Scaled Tags Per Million
Pig:
260.9
nTPM
Allen mouse:
12.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
713.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 713.8
2301
Female, age 85, both hemispheres
974.9
2188
Female, age 91, both hemispheres
796.7
2090
Male, age 80, both hemispheres
768.9
1984
Male, age 76, both hemispheres
314.8
Dorsal cochlear nucleus nTPM: 520.6
2187
Female, age 91, both hemispheres
700.0
2378
Male, age 80, both hemispheres
549.6
2370
Male, age 61, both hemispheres
475.0
2058
Male, age 76, both hemispheres
462.4
2802
Male, age 74, right hemisphere
416.0
Dorsal tegmental nucleus nTPM: 498.4
2083
Male, age 80, both hemispheres
698.2
2326
Male, age 74, both hemispheres
509.9
2358
Male, age 61, both hemispheres
404.2
1936
Male, age 76, left hemisphere
381.2
Dorsolateral tegmental area nTPM: 553.3
2751
Female, age 85, both hemispheres
783.0
2337
Male, age 61, both hemispheres
748.5
2654
Male, age 80, both hemispheres
648.8
2360
Male, age 74, both hemispheres
338.2
2141
Male, age 76, both hemispheres
248.2
Kolliker-Fuse nucleus nTPM: 551.3
2793
Female, age 91, left hemisphere
819.5
2163
Male, age 80, both hemispheres
524.5
2315
Male, age 76, right hemisphere
309.8
Lateral lemniscal nuclei nTPM: 570.2
2320
Female, age 91, left hemisphere
747.6
2036
Male, age 80, both hemispheres
617.5
2746
Female, age 85, left hemisphere
546.5
2169
Male, age 76, both hemispheres
476.1
2453
Male, age 74, right hemisphere
463.2
Lateral parabrachial nucleus nTPM: 625.1
2792
Male, age 76, both hemispheres
877.7
2013
Male, age 80, both hemispheres
622.8
2790
Male, age 61, both hemispheres
613.0
2139
Female, age 85, right hemisphere
387.0
Lateral vestibular nucleus nTPM: 625.1
2311
Male, age 80, both hemispheres
729.8
2184
Male, age 76, both hemispheres
520.3
Locus coeruleus nTPM: 244.7
2162
Male, age 80, both hemispheres
364.9
2720
Male, age 74, both hemispheres
340.7
2317
Female, age 72, unknown
247.5
2123
Female, age 91, both hemispheres
234.9
2014
Male, age 55, unknown
200.1
2788
Male, age 74, unknown
172.8
1980
Male, age 76, both hemispheres
151.9
Medial parabrachial nucleus nTPM: 636.2
2170
Female, age 91, both hemispheres
812.3
2463
Female, age 85, right hemisphere
702.5
2854
Male, age 80, both hemispheres
664.8
2156
Male, age 61, both hemispheres
524.9
2786
Male, age 76, both hemispheres
476.6
Medial periolivary nuclei nTPM: 557.1
2081
Male, age 80, both hemispheres
753.1
2458
Female, age 91, both hemispheres
650.7
2791
Male, age 74, right hemisphere
581.7
2063
Male, age 76, both hemispheres
441.6
2171
Female, age 85, both hemispheres
358.1
Motor facial nucleus nTPM: 598.9
2126
Male, age 61, both hemispheres
957.4
2697
Female, age 85, both hemispheres
713.7
2365
Male, age 74, right hemisphere
679.3
2327
Male, age 80, both hemispheres
446.2
2795
Female, age 91, both hemispheres
410.6
2062
Male, age 76, both hemispheres
386.1
Motor trigeminal nucleus nTPM: 569.3
2321
Female, age 91, both hemispheres
722.0
2560
Male, age 74, both hemispheres
610.8
2079
Male, age 80, both hemispheres
528.7
2335
Male, age 61, both hemispheres
513.6
2309
Male, age 76, both hemispheres
471.6
Nuclei of the trapezoid body nTPM: 497.1
2166
Male, age 80, both hemispheres
669.1
2159
Male, age 61, both hemispheres
595.7
2368
Female, age 91, both hemispheres
523.5
1983
Male, age 76, both hemispheres
406.8
2735
Female, age 85, both hemispheres
290.5
Nucleus raphe magnus nTPM: 461.4
2459
Female, age 91, both hemispheres
634.6
2328
Male, age 80, both hemispheres
583.7
2051
Male, age 76, both hemispheres
532.6
2455
Male, age 74, both hemispheres
469.7
2160
Male, age 61, both hemispheres
278.2
2172
Female, age 85, both hemispheres
269.4
Paramedian reticular nucleus nTPM: 523.3
2057
Male, age 80, both hemispheres
639.3
2050
Female, age 85, both hemispheres
560.2
2313
Male, age 61, both hemispheres
448.8
2052
Male, age 76, both hemispheres
444.7
Pedunculopontine tegmental nucleus nTPM: 508.0
2338
Male, age 61, both hemispheres
630.3
2334
Male, age 80, both hemispheres
525.2
1921
Female, age 85, both hemispheres
368.4
Pontine nuclei nTPM: 638.7
2454
Male, age 74, left hemisphere
910.3
2319
Female, age 91, both hemispheres
781.7
2115
Male, age 80, left hemisphere
708.3
2109
Female, age 72, unknown
663.2
1968
Male, age 76, left hemisphere
586.2
1863
Male, age 55, unknown
520.5
2787
Female, age 85, both hemispheres
473.4
2727
Male, age 61, right hemisphere
465.9
Pontine raphe nucleus nTPM: 370.7
2122
Female, age 85, midline
414.7
2853
Male, age 76, midline
326.7
Posteroventral cochlear nucleus nTPM: 650.9
2135
Female, age 91, both hemispheres
845.4
2341
Male, age 80, both hemispheres
818.9
2070
Male, age 76, both hemispheres
634.6
2371
Male, age 61, both hemispheres
566.5
2752
Female, age 85, both hemispheres
389.1
Principal sensory trigeminal nucleus nTPM: 495.4
2367
Female, age 91, left hemisphere
713.1
2324
Male, age 76, both hemispheres
447.7
2008
Male, age 80, left hemisphere
445.2
2158
Male, age 61, both hemispheres
375.5
Reticular pontine nucleus, caudal nTPM: 658.4
2559
Male, age 74, both hemispheres
768.3
2457
Female, age 91, both hemispheres
739.6
2092
Male, age 76, both hemispheres
623.2
2332
Male, age 80, right hemisphere
502.5
Reticular pontine nucleus, oral nTPM: 687.8
2361
Male, age 74, both hemispheres
827.6
2366
Female, age 91, both hemispheres
797.8
1939
Male, age 80, both hemispheres
645.7
2167
Male, age 76, both hemispheres
597.9
2012
Female, age 85, both hemispheres
570.2
Reticulotegmental nucleus nTPM: 485.6
2322
Female, age 91, both hemispheres
595.9
2333
Male, age 80, both hemispheres
578.9
2452
Male, age 74, both hemispheres
479.3
2325
Male, age 76, both hemispheres
288.4
Spinal trigeminal nucleus, oral nTPM: 494.9
2164
Male, age 80, both hemispheres
613.3
1978
Male, age 76, both hemispheres
515.4
2737
Female, age 85, both hemispheres
356.1
Subcoeruleus area nTPM: 528.2
2369
Female, age 85, left hemisphere
915.0
2089
Male, age 76, left hemisphere
516.3
1958
Male, age 80, both hemispheres
499.7
2451
Male, age 74, both hemispheres
359.4
2323
Female, age 91, left hemisphere
350.4
Superior olive nTPM: 594.8
2364
Male, age 74, right hemisphere
656.0
2329
Male, age 80, right hemisphere
638.5
2020
Male, age 76, both hemispheres
634.3
2561
Female, age 91, both hemispheres
585.0
1875
Female, age 85, both hemispheres
459.9
Ventral periolivary nuclei nTPM: 497.0
2023
Male, age 76, both hemispheres
683.9
2165
Male, age 80, both hemispheres
514.9
2794
Female, age 91, left hemisphere
420.9
2130
Female, age 85, both hemispheres
368.1
Ventrolateral tegmental area, A5 NE cell group nTPM: 606.9
2359
Male, age 61, both hemispheres
722.0
2456
Female, age 91, both hemispheres
679.5
2840
Female, age 85, both hemispheres
598.4
2161
Male, age 80, both hemispheres
571.5
1959
Male, age 76, both hemispheres
555.5
2449
Male, age 74, both hemispheres
514.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
260.9
Pig sample
Sample description
nTPM
Pons nTPM: 260.9
Samples: 4
Max nTPM: 376.2
Min nTPM: 198.9
Sample A
Female
198.9
Sample B
Female
200.8
Sample C
Male
267.7
Sample D
Male
376.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
