HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:205.5 nTPM
HPA Brain:355.5 nTPM
GTEx:205.5 nTPM
FANTOM5:159.9 Scaled Tags Per Million
Pig:164.9 nTPM
Mouse:353.1 nTPM
Allen mouse:5.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012499Antibody CAB009345
Glial cells Not detectedNot detected
Neuronal cells MediumNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 355.5
Sample id Sample description nTPM
Hippocampus
nTPM: 197.8
1911 Female, age 85, right hemisphere 264.8
2529 Female, age 94, left hemisphere 235.0
2621 Female, age 67, right hemisphere 228.9
1898 Male, age 80, left hemisphere 170.4
1855 Male, age 76, left hemisphere 145.4
2148 Female, age 91, left hemisphere 142.6
Dentate gyrus
nTPM: 221.0
2530 Female, age 94, left hemisphere 476.9
2528 Male, age 74, both hemispheres 229.0
2010 Male, age 76, both hemispheres 201.1
2246 Female, age 85, both hemispheres 184.4
2531 Female, age 67, both hemispheres 132.4
1927 Female, age 91, both hemispheres 102.2
Entorhinal gyrus
nTPM: 239.6
2117 Female, age 91, right hemisphere 461.7
2764 Male, age 80, right hemisphere 323.7
1938 Female, age 85, left hemisphere 179.6
1787 Male, age 76, left hemisphere 166.6
2613 Female, age 94, left hemisphere 162.7
2686 Male, age 75, right hemisphere 143.6
Hippocampus, CA1
nTPM: 155.5
2527 Male, age 74, both hemispheres 203.5
2082 Female, age 91, right hemisphere 195.2
1873 Female, age 85, both hemispheres 193.4
2749 Male, age 80, left hemisphere 141.5
2045 Male, age 76, both hemispheres 43.7
Hippocampus, CA2
nTPM: 224.4
2249 Male, age 74, both hemispheres 330.7
1963 Male, age 80, left hemisphere 265.3
2437 Female, age 94, left hemisphere 252.5
2113 Female, age 91, right hemisphere 201.2
1940 Female, age 85, left hemisphere 197.7
1892 Male, age 76, both hemispheres 99.1
Hippocampus, CA3
nTPM: 129.7
1891 Female, age 85, both hemispheres 314.6
1867 Male, age 76, both hemispheres 162.2
2436 Male, age 74, both hemispheres 152.6
2137 Male, age 80, left hemisphere 80.0
2620 Female, age 94, left hemisphere 40.7
2861 Female, age 67, both hemispheres 28.2
Parahippocampal cortex
nTPM: 167.6
2532 Female, age 72, left hemisphere 298.4
2692 Male, age 74, both hemispheres 262.5
1990 Female, age 91, right hemisphere 233.2
1850 Male, age 80, both hemispheres 172.5
2245 Female, age 91, both hemispheres 164.4
1933 Female, age 85, both hemispheres 155.7
2018 Male, age 76, both hemispheres 152.6
2250 Female, age 67, right hemisphere 100.3
2693 Female, age 94, both hemispheres 97.8
2622 Female, age 67, right hemisphere 38.6
Perirhinal gyrus
nTPM: 97.7
2521 Female, age 94, right hemisphere 112.9
2848 Male, age 76, right hemisphere 107.1
1794 Male, age 80, right hemisphere 107.0
1847 Female, age 91, left hemisphere 95.2
1841 Female, age 85, right hemisphere 66.3
Subiculum
nTPM: 355.5
2042 Male, age 76, both hemispheres 522.8
1901 Male, age 80, both hemispheres 454.6
2438 Female, age 94, left hemisphere 407.0
1977 Female, age 85, both hemispheres 314.4
2619 Male, age 74, both hemispheres 248.0
2729 Female, age 91, right hemisphere 186.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 205.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 205.5
Samples: 197

Max nTPM: 786.9
Min nTPM: 12.8
Std nTPM: 149.1
Median nTPM: 180.4
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 786.9
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 719.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 715.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 653.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 626.0
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 594.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 579.8
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 566.0
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 561.1
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 553.5
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 506.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 159.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 159.9
FF:10169-103B7 60 years, female 171.3
FF:10153-102I9 76 years, female 148.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 164.9
Pig sample Sample description nTPM
Subiculum
nTPM: 51.1
Samples: 4

Max nTPM: 63.1
Min nTPM: 39.5
Sample A Female 53.2
Sample B Female 63.1
Sample C Male 39.5
Sample D Male 48.6
Dorsal hippocampus
nTPM: 164.9
Samples: 4

Max nTPM: 263.9
Min nTPM: 41.5
Sample A Female 263.9
Sample B Female 109.8
Sample C Male 244.5
Sample D Male 41.5
Entorhinal cortex
nTPM: 43.7
Samples: 4

Max nTPM: 63.0
Min nTPM: 29.7
Sample A Female 31.5
Sample B Female 63.0
Sample C Male 29.7
Sample D Male 50.5
Ventral hippocampus
nTPM: 103.0
Samples: 4

Max nTPM: 152.0
Min nTPM: 41.7
Sample A Female 119.1
Sample B Female 41.7
Sample C Male 99.0
Sample D Male 152.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 353.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 162.8
Samples: 4

Max nTPM: 254.6
Min nTPM: 62.0
Sample A Male 254.6
Sample B Male 154.3
Sample C Female 180.2
Sample D Female 62.0
Hippocampal formation
nTPM: 353.2
Samples: 4

Max nTPM: 528.4
Min nTPM: 219.7
Sample A Male 219.7
Sample B Male 269.8
Sample C Female 528.4
Sample D Female 394.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.7
69736418 Antisense, RP_050503_04_G05, Mouse strain C57BL/6J (56 days, male) 5.7

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