HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:287.4 nTPM
HPA Brain:232.0 nTPM
GTEx:287.4 nTPM
FANTOM5:132.4 Scaled Tags Per Million
Pig:134.4 nTPM
Mouse:325.8 nTPM
Allen mouse:23.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA027407Antibody HPA052510
Glial cells Not detectedLow
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 232.0
Sample id Sample description nTPM
Hippocampus
nTPM: 201.8
1898 Male, age 80, left hemisphere 261.2
2529 Female, age 94, left hemisphere 214.7
1911 Female, age 85, right hemisphere 190.7
2621 Female, age 67, right hemisphere 186.9
2148 Female, age 91, left hemisphere 182.2
1855 Male, age 76, left hemisphere 175.0
Dentate gyrus
nTPM: 198.4
2010 Male, age 76, both hemispheres 230.9
1927 Female, age 91, both hemispheres 226.1
2528 Male, age 74, both hemispheres 225.5
2530 Female, age 94, left hemisphere 195.5
2246 Female, age 85, both hemispheres 182.4
2531 Female, age 67, both hemispheres 130.3
Entorhinal gyrus
nTPM: 191.8
2764 Male, age 80, right hemisphere 222.5
2117 Female, age 91, right hemisphere 219.3
1938 Female, age 85, left hemisphere 218.3
1787 Male, age 76, left hemisphere 202.1
2613 Female, age 94, left hemisphere 149.5
2686 Male, age 75, right hemisphere 139.3
Hippocampus, CA1
nTPM: 232.0
2749 Male, age 80, left hemisphere 321.2
2527 Male, age 74, both hemispheres 234.6
2082 Female, age 91, right hemisphere 205.0
1873 Female, age 85, both hemispheres 204.2
2045 Male, age 76, both hemispheres 194.9
Hippocampus, CA2
nTPM: 213.0
2249 Male, age 74, both hemispheres 272.4
1963 Male, age 80, left hemisphere 255.3
1892 Male, age 76, both hemispheres 202.5
1940 Female, age 85, left hemisphere 185.6
2113 Female, age 91, right hemisphere 184.3
2437 Female, age 94, left hemisphere 178.1
Hippocampus, CA3
nTPM: 197.7
2436 Male, age 74, both hemispheres 303.3
2137 Male, age 80, left hemisphere 214.7
1867 Male, age 76, both hemispheres 197.5
1891 Female, age 85, both hemispheres 178.8
2620 Female, age 94, left hemisphere 165.2
2861 Female, age 67, both hemispheres 126.9
Parahippocampal cortex
nTPM: 183.5
2250 Female, age 67, right hemisphere 219.1
1933 Female, age 85, both hemispheres 213.7
1990 Female, age 91, right hemisphere 211.3
2018 Male, age 76, both hemispheres 203.3
2245 Female, age 91, both hemispheres 200.6
1850 Male, age 80, both hemispheres 192.4
2532 Female, age 72, left hemisphere 155.2
2622 Female, age 67, right hemisphere 146.8
2692 Male, age 74, both hemispheres 146.7
2693 Female, age 94, both hemispheres 145.4
Perirhinal gyrus
nTPM: 208.5
1847 Female, age 91, left hemisphere 258.2
1794 Male, age 80, right hemisphere 241.8
1841 Female, age 85, right hemisphere 196.8
2521 Female, age 94, right hemisphere 189.7
2848 Male, age 76, right hemisphere 155.8
Subiculum
nTPM: 188.4
1977 Female, age 85, both hemispheres 227.1
2729 Female, age 91, right hemisphere 205.0
2619 Male, age 74, both hemispheres 194.3
1901 Male, age 80, both hemispheres 193.7
2042 Male, age 76, both hemispheres 181.5
2438 Female, age 94, left hemisphere 128.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 287.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 287.4
Samples: 197

Max nTPM: 883.4
Min nTPM: 139.0
Std nTPM: 84.3
Median nTPM: 273.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 883.4
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 578.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 564.9
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 513.0
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 464.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 449.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 442.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 441.8
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 438.7
GTEX-131YS-0011-R1a-SM-5DUXC 60-69 years, female 436.8
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 427.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 132.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 132.4
FF:10169-103B7 60 years, female 185.9
FF:10153-102I9 76 years, female 78.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 134.4
Pig sample Sample description nTPM
Subiculum
nTPM: 109.5
Samples: 4

Max nTPM: 134.5
Min nTPM: 98.5
Sample A Female 134.5
Sample B Female 104.2
Sample C Male 98.5
Sample D Male 100.8
Dorsal hippocampus
nTPM: 134.4
Samples: 4

Max nTPM: 168.4
Min nTPM: 101.9
Sample A Female 168.4
Sample B Female 132.3
Sample C Male 135.0
Sample D Male 101.9
Entorhinal cortex
nTPM: 112.1
Samples: 4

Max nTPM: 143.4
Min nTPM: 85.2
Sample A Female 94.6
Sample B Female 143.4
Sample C Male 125.0
Sample D Male 85.2
Ventral hippocampus
nTPM: 122.2
Samples: 4

Max nTPM: 135.9
Min nTPM: 102.9
Sample A Female 130.0
Sample B Female 102.9
Sample C Male 135.9
Sample D Male 119.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 325.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 311.1
Samples: 4

Max nTPM: 333.5
Min nTPM: 296.9
Sample A Male 296.9
Sample B Male 333.5
Sample C Female 312.8
Sample D Female 301.2
Hippocampal formation
nTPM: 325.8
Samples: 4

Max nTPM: 344.1
Min nTPM: 314.1
Sample A Male 329.6
Sample B Male 315.2
Sample C Female 314.1
Sample D Female 344.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 23.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 23.2
69262287 Antisense, RP_050303_01_F04, Mouse strain C57BL/6J (56 days, male) 24.8
74272036 Antisense, RP_060202_01_A03, Mouse strain C57BL/6J (56 days, male) 21.6

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