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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
275.7
nTPM
FANTOM5:
149.0
Scaled Tags Per Million
Pig:
191.5
nTPM
Allen mouse:
16.3
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
275.7
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 190.4
2090
Male, age 80, both hemispheres
210.9
1984
Male, age 76, both hemispheres
195.0
2188
Female, age 91, both hemispheres
192.4
2301
Female, age 85, both hemispheres
163.2
Dorsal cochlear nucleus nTPM: 211.6
2058
Male, age 76, both hemispheres
224.8
2187
Female, age 91, both hemispheres
219.5
2802
Male, age 74, right hemisphere
212.4
2370
Male, age 61, both hemispheres
211.6
2378
Male, age 80, both hemispheres
189.7
Dorsal tegmental nucleus nTPM: 215.8
2083
Male, age 80, both hemispheres
264.0
2326
Male, age 74, both hemispheres
216.3
1936
Male, age 76, left hemisphere
214.2
2358
Male, age 61, both hemispheres
168.7
Dorsolateral tegmental area nTPM: 249.0
2751
Female, age 85, both hemispheres
274.3
2654
Male, age 80, both hemispheres
270.9
2360
Male, age 74, both hemispheres
262.0
2141
Male, age 76, both hemispheres
227.3
2337
Male, age 61, both hemispheres
210.3
Kolliker-Fuse nucleus nTPM: 234.5
2315
Male, age 76, right hemisphere
279.0
2163
Male, age 80, both hemispheres
259.8
2793
Female, age 91, left hemisphere
164.8
Lateral lemniscal nuclei nTPM: 212.0
2169
Male, age 76, both hemispheres
241.9
2746
Female, age 85, left hemisphere
241.5
2036
Male, age 80, both hemispheres
231.9
2453
Male, age 74, right hemisphere
190.8
2320
Female, age 91, left hemisphere
154.2
Lateral parabrachial nucleus nTPM: 224.7
2139
Female, age 85, right hemisphere
269.8
2013
Male, age 80, both hemispheres
228.6
2792
Male, age 76, both hemispheres
205.8
2790
Male, age 61, both hemispheres
194.5
Lateral vestibular nucleus nTPM: 240.5
2184
Male, age 76, both hemispheres
253.2
2311
Male, age 80, both hemispheres
227.7
Locus coeruleus nTPM: 275.7
2123
Female, age 91, both hemispheres
351.9
2014
Male, age 55, unknown
328.8
1980
Male, age 76, both hemispheres
293.0
2317
Female, age 72, unknown
275.0
2162
Male, age 80, both hemispheres
245.5
2788
Male, age 74, unknown
232.3
2720
Male, age 74, both hemispheres
203.6
Medial parabrachial nucleus nTPM: 231.5
2170
Female, age 91, both hemispheres
259.0
2463
Female, age 85, right hemisphere
250.3
2786
Male, age 76, both hemispheres
232.8
2156
Male, age 61, both hemispheres
223.8
2854
Male, age 80, both hemispheres
191.8
Medial periolivary nuclei nTPM: 219.6
2063
Male, age 76, both hemispheres
271.6
2171
Female, age 85, both hemispheres
250.1
2791
Male, age 74, right hemisphere
248.3
2081
Male, age 80, both hemispheres
183.5
2458
Female, age 91, both hemispheres
144.5
Motor facial nucleus nTPM: 201.7
2062
Male, age 76, both hemispheres
291.5
2365
Male, age 74, right hemisphere
241.9
2126
Male, age 61, both hemispheres
194.7
2795
Female, age 91, both hemispheres
177.4
2697
Female, age 85, both hemispheres
158.2
2327
Male, age 80, both hemispheres
146.3
Motor trigeminal nucleus nTPM: 202.8
2309
Male, age 76, both hemispheres
225.6
2335
Male, age 61, both hemispheres
222.6
2079
Male, age 80, both hemispheres
205.3
2560
Male, age 74, both hemispheres
204.4
2321
Female, age 91, both hemispheres
156.3
Nuclei of the trapezoid body nTPM: 229.2
1983
Male, age 76, both hemispheres
295.7
2735
Female, age 85, both hemispheres
252.2
2159
Male, age 61, both hemispheres
247.7
2166
Male, age 80, both hemispheres
186.0
2368
Female, age 91, both hemispheres
164.4
Nucleus raphe magnus nTPM: 224.6
2160
Male, age 61, both hemispheres
306.1
2455
Male, age 74, both hemispheres
265.4
2172
Female, age 85, both hemispheres
224.0
2051
Male, age 76, both hemispheres
217.9
2328
Male, age 80, both hemispheres
181.0
2459
Female, age 91, both hemispheres
153.3
Paramedian reticular nucleus nTPM: 249.1
2057
Male, age 80, both hemispheres
275.8
2050
Female, age 85, both hemispheres
272.2
2313
Male, age 61, both hemispheres
236.0
2052
Male, age 76, both hemispheres
212.3
Pedunculopontine tegmental nucleus nTPM: 229.9
2334
Male, age 80, both hemispheres
251.9
1921
Female, age 85, both hemispheres
244.6
2338
Male, age 61, both hemispheres
193.1
Pontine nuclei nTPM: 245.3
1863
Male, age 55, unknown
296.0
2787
Female, age 85, both hemispheres
291.9
2727
Male, age 61, right hemisphere
287.3
2109
Female, age 72, unknown
251.3
1968
Male, age 76, left hemisphere
242.9
2454
Male, age 74, left hemisphere
223.2
2115
Male, age 80, left hemisphere
187.2
2319
Female, age 91, both hemispheres
182.8
Pontine raphe nucleus nTPM: 255.3
2122
Female, age 85, midline
271.3
2853
Male, age 76, midline
239.4
Posteroventral cochlear nucleus nTPM: 226.6
2752
Female, age 85, both hemispheres
285.5
2070
Male, age 76, both hemispheres
245.8
2371
Male, age 61, both hemispheres
217.7
2341
Male, age 80, both hemispheres
199.1
2135
Female, age 91, both hemispheres
184.9
Principal sensory trigeminal nucleus nTPM: 224.2
2158
Male, age 61, both hemispheres
291.4
2324
Male, age 76, both hemispheres
234.2
2008
Male, age 80, left hemisphere
214.8
2367
Female, age 91, left hemisphere
156.5
Reticular pontine nucleus, caudal nTPM: 199.0
2092
Male, age 76, both hemispheres
241.2
2559
Male, age 74, both hemispheres
209.4
2332
Male, age 80, right hemisphere
175.7
2457
Female, age 91, both hemispheres
169.6
Reticular pontine nucleus, oral nTPM: 228.1
2012
Female, age 85, both hemispheres
260.4
1939
Male, age 80, both hemispheres
258.0
2167
Male, age 76, both hemispheres
239.7
2361
Male, age 74, both hemispheres
226.8
2366
Female, age 91, both hemispheres
155.5
Reticulotegmental nucleus nTPM: 207.0
2325
Male, age 76, both hemispheres
221.4
2452
Male, age 74, both hemispheres
209.6
2333
Male, age 80, both hemispheres
208.5
2322
Female, age 91, both hemispheres
188.3
Spinal trigeminal nucleus, oral nTPM: 230.7
2737
Female, age 85, both hemispheres
263.4
1978
Male, age 76, both hemispheres
216.6
2164
Male, age 80, both hemispheres
212.0
Subcoeruleus area nTPM: 234.5
2323
Female, age 91, left hemisphere
260.5
2369
Female, age 85, left hemisphere
255.8
1958
Male, age 80, both hemispheres
227.2
2451
Male, age 74, both hemispheres
224.3
2089
Male, age 76, left hemisphere
204.7
Superior olive nTPM: 213.5
2364
Male, age 74, right hemisphere
277.9
2020
Male, age 76, both hemispheres
239.8
1875
Female, age 85, both hemispheres
225.4
2329
Male, age 80, right hemisphere
163.8
2561
Female, age 91, both hemispheres
160.4
Ventral periolivary nuclei nTPM: 198.9
2023
Male, age 76, both hemispheres
228.6
2165
Male, age 80, both hemispheres
220.2
2130
Female, age 85, both hemispheres
204.0
2794
Female, age 91, left hemisphere
142.7
Ventrolateral tegmental area, A5 NE cell group nTPM: 205.1
2359
Male, age 61, both hemispheres
234.4
2449
Male, age 74, both hemispheres
230.4
2840
Female, age 85, both hemispheres
202.1
1959
Male, age 76, both hemispheres
201.3
2161
Male, age 80, both hemispheres
189.8
2456
Female, age 91, both hemispheres
172.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
191.5
Pig sample
Sample description
nTPM
Pons nTPM: 191.5
Samples: 4
Max nTPM: 226.9
Min nTPM: 156.5
Sample A
Female
171.6
Sample B
Female
156.5
Sample C
Male
211.1
Sample D
Male
226.9
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
