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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
43.6
nTPM
HPA Brain:
61.2
nTPM
GTEx:
43.6
nTPM
FANTOM5:
78.5
Scaled Tags Per Million
Pig:
72.9
nTPM
Mouse:
88.2
nTPM
Allen mouse:
11.5
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
61.2
Sample id
Sample description
nTPM
Amygdala nTPM: 61.2
1987
Female, age 91, left hemisphere
66.5
2814
Male, age 76, right hemisphere
62.9
2695
Female, age 67, right hemisphere
59.2
2514
Male, age 75, right hemisphere
58.9
2517
Female, age 94, left hemisphere
58.4
Basal amygdala nTPM: 56.3
2110
Male, age 80, left hemisphere
64.8
2243
Female, age 91, right hemisphere
62.8
1955
Male, age 76, both hemispheres
60.4
2609
Male, age 75, right hemisphere
55.8
2685
Female, age 94, left hemisphere
51.9
2827
Female, age 67, right hemisphere
42.1
Central amygdala nTPM: 56.9
2239
Male, age 80, left hemisphere
65.6
2515
Male, age 75, right hemisphere
59.8
1905
Male, age 76, both hemispheres
56.6
2701
Female, age 91, right hemisphere
54.4
2826
Female, age 94, left hemisphere
48.3
Corticomedial amygdala nTPM: 60.2
2829
Male, age 80, left hemisphere
75.3
2240
Male, age 76, both hemispheres
62.9
2429
Female, age 94, left hemisphere
62.1
2242
Female, age 91, right hemisphere
60.8
2428
Male, age 75, right hemisphere
56.6
2535
Female, age 67, right hemisphere
43.6
Lateral amygdala nTPM: 54.5
1883
Male, age 76, both hemispheres
63.8
2516
Male, age 75, right hemisphere
62.8
2534
Female, age 94, left hemisphere
51.1
2255
Female, age 91, right hemisphere
50.8
2830
Female, age 67, right hemisphere
49.6
2256
Male, age 80, left hemisphere
48.8
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
43.6
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 43.6
Samples: 152
Max nTPM: 71.1
Min nTPM: 9.5
Std nTPM: 9.8
Median nTPM: 43.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
71.1
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
70.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
67.8
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
66.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
63.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
62.7
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
62.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
61.9
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
59.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
58.2
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
58.1
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
57.8
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
57.7
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
56.5
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
56.3
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
56.3
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
56.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
55.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
55.2
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
55.1
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
54.8
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
54.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
53.8
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
53.7
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
53.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
52.8
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
52.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
51.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
51.6
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
51.3
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
51.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
50.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
50.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
50.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
50.2
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
50.1
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
49.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
49.9
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
49.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
49.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
49.4
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
49.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
48.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
47.8
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
47.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
47.4
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
47.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
46.9
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
46.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
46.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
46.7
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
46.5
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
46.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
45.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
45.8
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
45.8
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
45.5
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
45.4
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
45.1
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
45.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
45.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
44.6
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
44.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
44.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
44.2
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
44.2
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
44.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
44.0
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
43.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
43.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
43.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
43.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
43.8
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
43.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
43.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
43.4
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
43.4
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
43.3
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
42.9
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
42.4
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
42.4
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
42.3
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
42.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
41.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
41.6
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
41.4
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
41.3
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
41.2
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
41.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
40.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
40.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
40.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
40.7
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
40.5
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.3
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
40.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
40.2
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
40.0
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
39.6
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
39.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
39.3
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
39.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
39.1
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
38.9
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
38.8
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
38.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
38.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
38.3
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
38.1
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
38.0
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
37.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
37.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
37.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
37.4
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
37.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
37.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
37.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
36.9
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
36.2
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
36.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
35.5
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
35.5
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
35.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
35.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
35.2
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
35.0
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
34.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
34.6
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
34.0
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
33.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
33.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
33.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
33.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
33.1
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.0
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
32.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
32.5
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
32.5
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
31.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
31.2
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
30.5
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
30.4
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
29.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
29.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
29.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
26.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
26.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
25.6
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
20.9
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
20.5
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
9.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
88.2
Mouse sample
Sample description
nTPM
Amygdala nTPM: 88.2
Samples: 4
Max nTPM: 91.3
Min nTPM: 86.3
Sample A
Male
91.3
Sample B
Male
87.6
Sample C
Female
87.6
Sample D
Female
86.3
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.