HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:42.8 nTPM
HPA Brain:83.8 nTPM
GTEx:42.8 nTPM
FANTOM5:73.0 Scaled Tags Per Million
Pig:98.5 nTPM
Mouse:95.8 nTPM
Allen mouse:12.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA000162
Glial cells High
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 83.8
Sample id Sample description nTPM
Hippocampus
nTPM: 58.2
1898 Male, age 80, left hemisphere 77.7
1855 Male, age 76, left hemisphere 61.4
2148 Female, age 91, left hemisphere 54.7
2621 Female, age 67, right hemisphere 54.2
1911 Female, age 85, right hemisphere 53.3
2529 Female, age 94, left hemisphere 47.9
Dentate gyrus
nTPM: 58.7
1927 Female, age 91, both hemispheres 73.7
2010 Male, age 76, both hemispheres 63.5
2246 Female, age 85, both hemispheres 57.8
2528 Male, age 74, both hemispheres 57.0
2530 Female, age 94, left hemisphere 50.2
2531 Female, age 67, both hemispheres 49.8
Entorhinal gyrus
nTPM: 62.9
1938 Female, age 85, left hemisphere 76.8
2764 Male, age 80, right hemisphere 68.6
1787 Male, age 76, left hemisphere 67.5
2613 Female, age 94, left hemisphere 65.5
2117 Female, age 91, right hemisphere 50.1
2686 Male, age 75, right hemisphere 49.1
Hippocampus, CA1
nTPM: 66.0
2749 Male, age 80, left hemisphere 89.8
1873 Female, age 85, both hemispheres 64.8
2045 Male, age 76, both hemispheres 62.9
2082 Female, age 91, right hemisphere 58.1
2527 Male, age 74, both hemispheres 54.3
Hippocampus, CA2
nTPM: 62.3
1892 Male, age 76, both hemispheres 74.8
1963 Male, age 80, left hemisphere 70.4
1940 Female, age 85, left hemisphere 61.6
2249 Male, age 74, both hemispheres 61.1
2113 Female, age 91, right hemisphere 56.7
2437 Female, age 94, left hemisphere 49.5
Hippocampus, CA3
nTPM: 62.0
2137 Male, age 80, left hemisphere 87.4
1867 Male, age 76, both hemispheres 61.6
2620 Female, age 94, left hemisphere 60.1
2436 Male, age 74, both hemispheres 59.5
1891 Female, age 85, both hemispheres 56.3
2861 Female, age 67, both hemispheres 47.2
Parahippocampal cortex
nTPM: 64.5
1850 Male, age 80, both hemispheres 85.9
1933 Female, age 85, both hemispheres 72.9
2693 Female, age 94, both hemispheres 72.5
1990 Female, age 91, right hemisphere 72.3
2245 Female, age 91, both hemispheres 64.9
2250 Female, age 67, right hemisphere 63.3
2532 Female, age 72, left hemisphere 61.8
2018 Male, age 76, both hemispheres 55.3
2692 Male, age 74, both hemispheres 49.2
2622 Female, age 67, right hemisphere 46.6
Perirhinal gyrus
nTPM: 83.8
1847 Female, age 91, left hemisphere 92.2
1841 Female, age 85, right hemisphere 86.0
1794 Male, age 80, right hemisphere 85.6
2521 Female, age 94, right hemisphere 77.5
2848 Male, age 76, right hemisphere 77.5
Subiculum
nTPM: 54.9
1977 Female, age 85, both hemispheres 68.4
1901 Male, age 80, both hemispheres 62.2
2729 Female, age 91, right hemisphere 52.6
2438 Female, age 94, left hemisphere 50.0
2042 Male, age 76, both hemispheres 48.1
2619 Male, age 74, both hemispheres 47.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 42.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 42.8
Samples: 197

Max nTPM: 67.7
Min nTPM: 14.9
Std nTPM: 8.9
Median nTPM: 41.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 67.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 65.1
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 64.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 64.2
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 63.3
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 62.6
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 62.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 61.8
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 61.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 60.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 60.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 73.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.0
FF:10169-103B7 60 years, female 84.1
FF:10153-102I9 76 years, female 61.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 98.5
Pig sample Sample description nTPM
Subiculum
nTPM: 88.7
Samples: 4

Max nTPM: 114.4
Min nTPM: 76.4
Sample A Female 114.4
Sample B Female 81.4
Sample C Male 82.5
Sample D Male 76.4
Dorsal hippocampus
nTPM: 81.0
Samples: 4

Max nTPM: 87.9
Min nTPM: 70.5
Sample A Female 85.2
Sample B Female 87.9
Sample C Male 80.3
Sample D Male 70.5
Entorhinal cortex
nTPM: 98.5
Samples: 4

Max nTPM: 114.1
Min nTPM: 85.7
Sample A Female 93.2
Sample B Female 114.1
Sample C Male 100.9
Sample D Male 85.7
Ventral hippocampus
nTPM: 79.1
Samples: 4

Max nTPM: 86.4
Min nTPM: 72.2
Sample A Female 80.2
Sample B Female 72.2
Sample C Male 86.4
Sample D Male 77.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 95.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 95.8
Samples: 4

Max nTPM: 108.3
Min nTPM: 88.1
Sample A Male 90.4
Sample B Male 96.4
Sample C Female 88.1
Sample D Female 108.3
Hippocampal formation
nTPM: 87.5
Samples: 4

Max nTPM: 94.6
Min nTPM: 75.7
Sample A Male 93.3
Sample B Male 94.6
Sample C Female 86.5
Sample D Female 75.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.3
70429453 Antisense, RP_050614_01_F11, Mouse strain C57BL/6J (56 days, male) 12.3

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