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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
39.2
nTPM
HPA Brain:
71.8
nTPM
GTEx:
39.2
nTPM
FANTOM5:
24.8
Scaled Tags Per Million
Pig:
19.1
nTPM
Mouse:
22.1
nTPM
Allen mouse:
12.6
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max nTPM
71.8
Sample id
Sample description
nTPM
Amygdala nTPM: 62.3
2814
Male, age 76, right hemisphere
79.2
2695
Female, age 67, right hemisphere
75.4
2517
Female, age 94, left hemisphere
54.9
2514
Male, age 75, right hemisphere
52.8
1987
Female, age 91, left hemisphere
49.4
Basal amygdala nTPM: 62.5
2827
Female, age 67, right hemisphere
74.2
1955
Male, age 76, both hemispheres
69.4
2609
Male, age 75, right hemisphere
69.2
2685
Female, age 94, left hemisphere
62.5
2110
Male, age 80, left hemisphere
50.9
2243
Female, age 91, right hemisphere
48.7
Central amygdala nTPM: 65.3
1905
Male, age 76, both hemispheres
78.4
2826
Female, age 94, left hemisphere
70.6
2515
Male, age 75, right hemisphere
63.3
2239
Male, age 80, left hemisphere
57.9
2701
Female, age 91, right hemisphere
56.0
Corticomedial amygdala nTPM: 53.7
2535
Female, age 67, right hemisphere
64.9
2428
Male, age 75, right hemisphere
59.0
2240
Male, age 76, both hemispheres
56.1
2429
Female, age 94, left hemisphere
53.3
2829
Male, age 80, left hemisphere
44.8
2242
Female, age 91, right hemisphere
44.0
Lateral amygdala nTPM: 71.8
2830
Female, age 67, right hemisphere
89.3
2516
Male, age 75, right hemisphere
71.2
2534
Female, age 94, left hemisphere
71.0
1883
Male, age 76, both hemispheres
68.7
2256
Male, age 80, left hemisphere
68.1
2255
Female, age 91, right hemisphere
62.4
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
39.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 39.2
Samples: 152
Max nTPM: 78.2
Min nTPM: 20.5
Std nTPM: 10.8
Median nTPM: 36.8
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
78.2
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
72.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
68.8
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
68.8
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
62.8
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
61.3
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
60.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
59.4
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
56.0
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
55.6
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
55.5
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
55.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
54.7
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
54.2
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
54.0
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
53.1
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
53.1
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
52.8
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
52.1
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
51.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
51.0
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
50.8
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
50.6
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
50.6
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
50.2
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
49.9
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
49.5
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
49.4
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
49.2
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
48.8
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
48.7
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
48.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
47.9
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
47.5
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
47.4
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.8
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
46.1
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
45.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
45.5
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
45.3
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
45.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
44.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
44.4
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
44.2
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
43.9
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
43.7
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
43.6
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
43.3
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
42.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
42.6
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
42.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
42.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
42.0
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
41.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
41.8
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
41.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
41.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
41.5
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
41.4
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
40.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
40.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
40.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
40.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
40.3
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
39.8
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
39.2
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
38.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
38.6
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
37.9
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
37.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
37.6
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
37.5
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
37.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
37.1
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
37.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
36.8
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
36.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
36.3
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
36.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
36.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
36.2
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
36.1
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
35.9
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
35.7
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
35.7
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
35.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
35.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
35.3
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
34.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
34.8
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
34.7
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
34.6
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
34.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
34.5
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
34.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
34.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
34.1
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
34.1
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
34.0
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
34.0
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
33.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
33.5
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
33.5
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
33.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
32.5
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
32.4
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
32.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
32.2
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
32.0
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
32.0
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
31.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
31.5
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
31.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
31.4
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
31.4
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
31.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
31.0
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
30.3
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
30.3
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
29.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
29.8
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
29.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
29.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
29.5
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
29.4
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
29.1
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
29.0
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
28.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
28.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
28.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
28.4
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
28.2
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
27.9
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
27.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
27.7
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
27.4
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
27.2
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
26.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
26.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
26.0
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
25.6
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
25.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
25.3
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
24.6
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
24.6
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
23.9
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
23.3
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
22.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
22.2
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
22.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
22.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
20.5
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
22.1
Mouse sample
Sample description
nTPM
Amygdala nTPM: 22.1
Samples: 4
Max nTPM: 24.8
Min nTPM: 20.7
Sample A
Male
22.1
Sample B
Male
20.7
Sample C
Female
24.8
Sample D
Female
20.9
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
