HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
RNA expressioni
Consensus:20.3 nTPM
HPA Brain:15.4 nTPM
GTEx:20.3 nTPM
FANTOM5:29.2 Scaled Tags Per Million
Pig:10.9 nTPM
Mouse:15.6 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035947
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 15.4
Sample id Sample description nTPM
Hippocampus
nTPM: 11.5
1898 Male, age 80, left hemisphere 16.1
1855 Male, age 76, left hemisphere 13.7
1911 Female, age 85, right hemisphere 11.5
2621 Female, age 67, right hemisphere 10.1
2148 Female, age 91, left hemisphere 9.3
2529 Female, age 94, left hemisphere 8.3
Dentate gyrus
nTPM: 12.0
2010 Male, age 76, both hemispheres 16.6
1927 Female, age 91, both hemispheres 13.9
2528 Male, age 74, both hemispheres 11.5
2530 Female, age 94, left hemisphere 10.6
2531 Female, age 67, both hemispheres 10.4
2246 Female, age 85, both hemispheres 9.3
Entorhinal gyrus
nTPM: 11.7
1938 Female, age 85, left hemisphere 15.0
2613 Female, age 94, left hemisphere 12.1
2117 Female, age 91, right hemisphere 11.4
1787 Male, age 76, left hemisphere 11.2
2764 Male, age 80, right hemisphere 10.5
2686 Male, age 75, right hemisphere 10.2
Hippocampus, CA1
nTPM: 15.4
2749 Male, age 80, left hemisphere 24.4
1873 Female, age 85, both hemispheres 17.3
2045 Male, age 76, both hemispheres 16.0
2082 Female, age 91, right hemisphere 9.8
2527 Male, age 74, both hemispheres 9.7
Hippocampus, CA2
nTPM: 12.9
1892 Male, age 76, both hemispheres 16.4
1963 Male, age 80, left hemisphere 15.6
1940 Female, age 85, left hemisphere 13.1
2249 Male, age 74, both hemispheres 13.0
2437 Female, age 94, left hemisphere 10.6
2113 Female, age 91, right hemisphere 9.0
Hippocampus, CA3
nTPM: 13.4
1867 Male, age 76, both hemispheres 18.0
2137 Male, age 80, left hemisphere 17.9
2436 Male, age 74, both hemispheres 13.3
1891 Female, age 85, both hemispheres 12.3
2620 Female, age 94, left hemisphere 10.6
2861 Female, age 67, both hemispheres 8.2
Parahippocampal cortex
nTPM: 11.6
1850 Male, age 80, both hemispheres 15.2
1933 Female, age 85, both hemispheres 14.6
2250 Female, age 67, right hemisphere 12.8
1990 Female, age 91, right hemisphere 12.3
2018 Male, age 76, both hemispheres 11.5
2245 Female, age 91, both hemispheres 11.4
2532 Female, age 72, left hemisphere 11.0
2692 Male, age 74, both hemispheres 10.0
2693 Female, age 94, both hemispheres 9.1
2622 Female, age 67, right hemisphere 8.0
Perirhinal gyrus
nTPM: 14.0
1841 Female, age 85, right hemisphere 17.2
1847 Female, age 91, left hemisphere 15.8
1794 Male, age 80, right hemisphere 14.9
2521 Female, age 94, right hemisphere 12.2
2848 Male, age 76, right hemisphere 9.9
Subiculum
nTPM: 13.6
1977 Female, age 85, both hemispheres 16.1
1901 Male, age 80, both hemispheres 15.3
2438 Female, age 94, left hemisphere 15.0
2619 Male, age 74, both hemispheres 12.4
2042 Male, age 76, both hemispheres 12.0
2729 Female, age 91, right hemisphere 10.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 20.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 20.3
Samples: 197

Max nTPM: 54.7
Min nTPM: 7.1
Std nTPM: 7.7
Median nTPM: 19.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 54.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 48.5
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 38.9
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 37.4
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 36.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 36.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 36.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 35.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 35.0
GTEX-1CB4G-0011-R1b-SM-9QEHT 60-69 years, male 35.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 34.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 29.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 29.2
FF:10169-103B7 60 years, female 39.4
FF:10153-102I9 76 years, female 19.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.9
Pig sample Sample description nTPM
Subiculum
nTPM: 8.8
Samples: 4

Max nTPM: 9.1
Min nTPM: 8.4
Sample A Female 9.1
Sample B Female 8.4
Sample C Male 8.9
Sample D Male 8.9
Dorsal hippocampus
nTPM: 10.9
Samples: 4

Max nTPM: 12.1
Min nTPM: 10.1
Sample A Female 12.1
Sample B Female 10.1
Sample C Male 10.9
Sample D Male 10.6
Entorhinal cortex
nTPM: 9.3
Samples: 4

Max nTPM: 9.9
Min nTPM: 8.8
Sample A Female 9.4
Sample B Female 9.9
Sample C Male 9.2
Sample D Male 8.8
Ventral hippocampus
nTPM: 9.4
Samples: 4

Max nTPM: 11.1
Min nTPM: 8.3
Sample A Female 8.3
Sample B Female 9.1
Sample C Male 8.9
Sample D Male 11.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 15.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.6
Samples: 4

Max nTPM: 16.3
Min nTPM: 15.0
Sample A Male 15.0
Sample B Male 16.1
Sample C Female 16.3
Sample D Female 15.0
Hippocampal formation
nTPM: 14.9
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.6
Sample A Male 17.2
Sample B Male 14.5
Sample C Female 13.6
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68410249 Antisense, RP_041214_01_E07, Mouse strain C57BL/6J (56 days, male) 0.3

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