HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:39.7 nTPM
HPA Brain:43.0 nTPM
GTEx:39.7 nTPM
FANTOM5:88.7 Scaled Tags Per Million
Pig:20.8 nTPM
Mouse:43.9 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 43.0
Sample id Sample description nTPM
Hippocampus
nTPM: 33.9
2529 Female, age 94, left hemisphere 43.6
1911 Female, age 85, right hemisphere 35.4
2148 Female, age 91, left hemisphere 33.3
2621 Female, age 67, right hemisphere 31.3
1855 Male, age 76, left hemisphere 30.3
1898 Male, age 80, left hemisphere 29.7
Dentate gyrus
nTPM: 35.6
2530 Female, age 94, left hemisphere 47.2
2531 Female, age 67, both hemispheres 35.0
2010 Male, age 76, both hemispheres 34.9
2528 Male, age 74, both hemispheres 34.5
2246 Female, age 85, both hemispheres 33.8
1927 Female, age 91, both hemispheres 28.4
Entorhinal gyrus
nTPM: 38.1
2117 Female, age 91, right hemisphere 49.8
2764 Male, age 80, right hemisphere 40.4
2686 Male, age 75, right hemisphere 38.0
1787 Male, age 76, left hemisphere 35.6
2613 Female, age 94, left hemisphere 35.1
1938 Female, age 85, left hemisphere 29.7
Hippocampus, CA1
nTPM: 31.3
2527 Male, age 74, both hemispheres 35.8
2082 Female, age 91, right hemisphere 34.9
1873 Female, age 85, both hemispheres 33.0
2045 Male, age 76, both hemispheres 28.1
2749 Male, age 80, left hemisphere 24.7
Hippocampus, CA2
nTPM: 37.0
2437 Female, age 94, left hemisphere 42.2
1963 Male, age 80, left hemisphere 40.5
1940 Female, age 85, left hemisphere 39.3
2113 Female, age 91, right hemisphere 37.0
2249 Male, age 74, both hemispheres 33.0
1892 Male, age 76, both hemispheres 30.3
Hippocampus, CA3
nTPM: 33.7
1891 Female, age 85, both hemispheres 43.3
2620 Female, age 94, left hemisphere 38.0
1867 Male, age 76, both hemispheres 33.8
2436 Male, age 74, both hemispheres 31.0
2861 Female, age 67, both hemispheres 30.6
2137 Male, age 80, left hemisphere 25.3
Parahippocampal cortex
nTPM: 34.6
2532 Female, age 72, left hemisphere 42.1
2692 Male, age 74, both hemispheres 40.4
2018 Male, age 76, both hemispheres 38.7
1990 Female, age 91, right hemisphere 37.8
2693 Female, age 94, both hemispheres 35.9
1850 Male, age 80, both hemispheres 33.6
1933 Female, age 85, both hemispheres 31.4
2245 Female, age 91, both hemispheres 31.0
2622 Female, age 67, right hemisphere 29.5
2250 Female, age 67, right hemisphere 25.8
Perirhinal gyrus
nTPM: 29.7
2521 Female, age 94, right hemisphere 33.7
2848 Male, age 76, right hemisphere 31.7
1794 Male, age 80, right hemisphere 29.0
1841 Female, age 85, right hemisphere 28.6
1847 Female, age 91, left hemisphere 25.3
Subiculum
nTPM: 43.0
2042 Male, age 76, both hemispheres 57.9
2438 Female, age 94, left hemisphere 45.7
1977 Female, age 85, both hemispheres 42.1
1901 Male, age 80, both hemispheres 41.9
2619 Male, age 74, both hemispheres 36.5
2729 Female, age 91, right hemisphere 33.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.7
Samples: 197

Max nTPM: 123.9
Min nTPM: 18.1
Std nTPM: 16.5
Median nTPM: 35.2
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 123.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 115.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 102.4
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 83.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 76.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 73.3
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 72.9
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 72.9
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 70.6
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 70.6
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 70.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 88.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 88.7
FF:10169-103B7 60 years, female 90.3
FF:10153-102I9 76 years, female 87.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.8
Pig sample Sample description nTPM
Subiculum
nTPM: 18.8
Samples: 4

Max nTPM: 25.0
Min nTPM: 16.3
Sample A Female 25.0
Sample B Female 16.6
Sample C Male 17.3
Sample D Male 16.3
Dorsal hippocampus
nTPM: 20.8
Samples: 4

Max nTPM: 27.5
Min nTPM: 16.4
Sample A Female 27.5
Sample B Female 19.1
Sample C Male 20.0
Sample D Male 16.4
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 17.1
Min nTPM: 15.5
Sample A Female 16.9
Sample B Female 16.5
Sample C Male 17.1
Sample D Male 15.5
Ventral hippocampus
nTPM: 19.8
Samples: 4

Max nTPM: 21.4
Min nTPM: 15.6
Sample A Female 21.0
Sample B Female 15.6
Sample C Male 21.3
Sample D Male 21.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 38.4
Samples: 4

Max nTPM: 46.4
Min nTPM: 35.3
Sample A Male 36.5
Sample B Male 35.3
Sample C Female 46.4
Sample D Female 35.5
Hippocampal formation
nTPM: 43.9
Samples: 4

Max nTPM: 47.0
Min nTPM: 40.3
Sample A Male 40.3
Sample B Male 47.0
Sample C Female 46.7
Sample D Female 41.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
69015206 Antisense, RP_050310_02_E05, Mouse strain C57BL/6J (56 days, male) 5.2

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