HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:110.4 nTPM
HPA Brain:216.5 nTPM
GTEx:110.4 nTPM
FANTOM5:41.3 Scaled Tags Per Million
Pig:338.0 nTPM
Mouse:450.2 nTPM
Allen mouse:16.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB022461
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 216.5
Sample id Sample description nTPM
Hippocampus
nTPM: 216.5
2621 Female, age 67, right hemisphere 275.5
1911 Female, age 85, right hemisphere 238.5
2148 Female, age 91, left hemisphere 227.1
2529 Female, age 94, left hemisphere 204.1
1855 Male, age 76, left hemisphere 180.1
1898 Male, age 80, left hemisphere 173.8
Dentate gyrus
nTPM: 183.5
1927 Female, age 91, both hemispheres 246.2
2531 Female, age 67, both hemispheres 222.9
2530 Female, age 94, left hemisphere 179.5
2010 Male, age 76, both hemispheres 172.2
2246 Female, age 85, both hemispheres 143.8
2528 Male, age 74, both hemispheres 136.3
Entorhinal gyrus
nTPM: 163.8
2613 Female, age 94, left hemisphere 213.5
1938 Female, age 85, left hemisphere 159.7
2686 Male, age 75, right hemisphere 159.4
2117 Female, age 91, right hemisphere 154.3
1787 Male, age 76, left hemisphere 149.5
2764 Male, age 80, right hemisphere 146.3
Hippocampus, CA1
nTPM: 197.1
2749 Male, age 80, left hemisphere 305.4
2527 Male, age 74, both hemispheres 209.2
1873 Female, age 85, both hemispheres 182.6
2082 Female, age 91, right hemisphere 145.4
2045 Male, age 76, both hemispheres 143.0
Hippocampus, CA2
nTPM: 183.9
1963 Male, age 80, left hemisphere 308.9
1892 Male, age 76, both hemispheres 184.7
2113 Female, age 91, right hemisphere 184.4
2249 Male, age 74, both hemispheres 145.3
2437 Female, age 94, left hemisphere 142.4
1940 Female, age 85, left hemisphere 137.4
Hippocampus, CA3
nTPM: 202.6
2137 Male, age 80, left hemisphere 293.7
2861 Female, age 67, both hemispheres 249.9
2620 Female, age 94, left hemisphere 206.5
1867 Male, age 76, both hemispheres 183.4
1891 Female, age 85, both hemispheres 152.9
2436 Male, age 74, both hemispheres 128.9
Parahippocampal cortex
nTPM: 159.1
2245 Female, age 91, both hemispheres 251.1
2250 Female, age 67, right hemisphere 183.3
2622 Female, age 67, right hemisphere 170.5
2018 Male, age 76, both hemispheres 151.3
1990 Female, age 91, right hemisphere 149.5
1933 Female, age 85, both hemispheres 147.7
2532 Female, age 72, left hemisphere 140.9
2693 Female, age 94, both hemispheres 138.9
1850 Male, age 80, both hemispheres 133.2
2692 Male, age 74, both hemispheres 124.9
Perirhinal gyrus
nTPM: 156.8
1847 Female, age 91, left hemisphere 187.1
2521 Female, age 94, right hemisphere 162.7
1841 Female, age 85, right hemisphere 149.8
1794 Male, age 80, right hemisphere 148.7
2848 Male, age 76, right hemisphere 135.5
Subiculum
nTPM: 144.6
1901 Male, age 80, both hemispheres 168.7
2042 Male, age 76, both hemispheres 164.7
2729 Female, age 91, right hemisphere 145.4
1977 Female, age 85, both hemispheres 138.4
2619 Male, age 74, both hemispheres 130.1
2438 Female, age 94, left hemisphere 120.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 110.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 110.4
Samples: 197

Max nTPM: 383.1
Min nTPM: 21.2
Std nTPM: 57.5
Median nTPM: 101.5
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 383.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 319.2
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 257.2
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 253.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 251.5
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 249.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 237.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 235.2
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 234.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 231.9
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 221.0
Show allShow less

HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 41.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 41.3
FF:10153-102I9 76 years, female 42.2
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 338.0
Pig sample Sample description nTPM
Subiculum
nTPM: 254.9
Samples: 4

Max nTPM: 344.2
Min nTPM: 212.5
Sample A Female 344.2
Sample B Female 221.9
Sample C Male 240.9
Sample D Male 212.5
Dorsal hippocampus
nTPM: 326.3
Samples: 4

Max nTPM: 427.6
Min nTPM: 256.9
Sample A Female 427.6
Sample B Female 349.8
Sample C Male 271.0
Sample D Male 256.9
Entorhinal cortex
nTPM: 338.0
Samples: 4

Max nTPM: 386.8
Min nTPM: 296.7
Sample A Female 337.6
Sample B Female 330.7
Sample C Male 386.8
Sample D Male 296.7
Ventral hippocampus
nTPM: 302.7
Samples: 4

Max nTPM: 441.8
Min nTPM: 198.0
Sample A Female 257.6
Sample B Female 198.0
Sample C Male 313.2
Sample D Male 441.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 450.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 374.9
Samples: 4

Max nTPM: 389.7
Min nTPM: 335.1
Sample A Male 389.7
Sample B Male 335.1
Sample C Female 388.3
Sample D Female 386.4
Hippocampal formation
nTPM: 450.2
Samples: 4

Max nTPM: 501.1
Min nTPM: 409.4
Sample A Male 447.7
Sample B Male 442.4
Sample C Female 501.1
Sample D Female 409.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 16.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 16.0
74271623 Antisense, RP_060202_01_A01, Mouse strain C57BL/6J (56 days, male) 17.9
68151446 Antisense, RP_041116_01_C05, Mouse strain C57BL/6J (56 days, male) 14.0

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.


contact@proteinatlas.org