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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
527.1
nTPM
HPA Brain:
282.4
nTPM
GTEx:
527.1
nTPM
FANTOM5:
674.0
Scaled Tags Per Million
Pig:
1236.5
nTPM
Mouse:
566.6
nTPM
Allen mouse:
7.4
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max nTPM
282.4
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 248.5
2666
Male, age 74, left hemisphere
272.8
1870
Female, age 42, unknown
272.4
1827
Male, age 72, unknown
269.7
2411
Female, age 72, unknown
260.2
1833
Male, age 53, unknown
258.6
2828
Female, age 72, unknown
256.9
2019
Male, age 18, unknown
250.0
1830
Male, age 51, unknown
248.5
2219
Male, age 76, both hemispheres
215.6
2586
Male, age 75, left hemisphere
180.3
Dorsal raphe nucleus nTPM: 278.5
2298
Female, age 72, unknown
341.2
2750
Male, age 76, both hemispheres
271.3
1828
Male, age 53, unknown
269.1
2016
Female, age 72, unknown
264.7
2047
Male, age 72, unknown
246.4
Inferior colliculus nTPM: 259.2
2097
Female, age 72, unknown
283.3
2849
Male, age 72, unknown
260.6
1848
Female, age 42, unknown
250.2
1890
Male, age 53, unknown
242.6
Median raphe nucleus nTPM: 263.5
2220
Male, age 76, midline
263.5
Periaquaductal grey, anterior nTPM: 248.7
1795
Male, age 51, unknown
259.4
1947
Male, age 18, unknown
243.9
2502
Female, age 75, unknown
242.9
Periaquaductal grey, dorsal nTPM: 263.1
2850
Male, age 76, both hemispheres
313.4
1840
Male, age 53, unknown
260.0
1831
Male, age 72, unknown
252.3
2464
Female, age 72, unknown
226.6
Periaquaductal grey, lateral nTPM: 242.8
2140
Male, age 76, both hemispheres
244.6
2053
Male, age 18, unknown
242.8
2272
Male, age 74, both hemispheres
241.0
Pretectal area nTPM: 282.4
1817
Female, age 42, unknown
323.8
1815
Male, age 53, unknown
313.5
2224
Female, age 72, unknown
311.1
1816
Male, age 51, unknown
305.3
1944
Female, age 72, unknown
300.1
2273
Male, age 74, both hemispheres
294.6
2007
Male, age 72, unknown
289.2
2825
Male, age 18, unknown
268.3
2667
Female, age 75, unknown
236.5
2316
Male, age 76, right hemisphere
232.6
2407
Male, age 75, both hemispheres
231.2
Red nucleus nTPM: 270.5
2725
Female, age 75, unknown
328.4
1821
Female, age 72, unknown
321.9
2503
Female, age 72, unknown
311.1
2823
Male, age 76, right hemisphere
275.1
1904
Male, age 53, unknown
262.3
2588
Male, age 74, left hemisphere
259.5
2785
Male, age 18, unknown
258.3
1954
Female, age 42, unknown
256.0
2227
Male, age 72, unknown
255.1
1865
Male, age 51, unknown
253.2
2769
Male, age 72, unknown
245.7
2584
Male, age 75, left hemisphere
219.1
Substantia nigra nTPM: 275.5
2241
Male, age 72, unknown
319.3
1916
Female, age 42, unknown
301.0
1889
Female, age 72, unknown
295.6
2699
Male, age 18, unknown
290.5
1851
Male, age 51, unknown
279.6
1941
Male, age 53, unknown
279.4
2665
Male, age 74, both hemispheres
267.3
2590
Female, age 75, unknown
262.3
2409
Female, age 72, unknown
239.2
2583
Male, age 75, right hemisphere
220.8
Superior colliculus nTPM: 263.2
2587
Male, age 74, left hemisphere
303.1
2668
Female, age 75, unknown
272.3
2261
Male, age 18, unknown
271.0
1913
Female, age 42, unknown
266.9
1995
Male, age 72, unknown
265.9
2087
Female, age 72, unknown
265.8
1796
Male, age 53, unknown
262.2
1839
Male, age 51, unknown
249.3
1895
Male, age 76, right hemisphere
239.3
2664
Male, age 75, both hemispheres
236.0
Ventral tegmental area nTPM: 270.2
2223
Female, age 72, unknown
298.9
2218
Male, age 76, both hemispheres
287.4
1915
Female, age 42, unknown
275.7
1942
Male, age 51, unknown
258.1
2021
Male, age 53, unknown
255.2
2410
Female, age 72, unknown
246.0
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
527.1
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 527.1
Samples: 139
Max nTPM: 905.9
Min nTPM: 348.8
Std nTPM: 114.2
Median nTPM: 513.7
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
905.9
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
898.2
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
863.5
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
798.3
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
787.2
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
761.9
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
750.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
731.8
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
724.4
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
721.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
711.0
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
691.2
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
690.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
682.2
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
678.0
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
677.5
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
670.1
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
656.0
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
649.1
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
646.9
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
645.0
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
640.1
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
636.1
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
630.8
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
629.1
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
623.2
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
618.8
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
618.0
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
616.7
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
612.0
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
611.5
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
609.9
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
607.4
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
606.6
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
601.2
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
600.7
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
600.5
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
588.4
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
580.6
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
579.4
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
576.8
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
569.4
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
569.1
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
563.5
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
558.7
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
545.8
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
544.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
543.7
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
542.1
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
539.3
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
539.2
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
538.6
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
534.7
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
534.3
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
529.9
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
526.5
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
526.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
524.2
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
523.7
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
521.8
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
521.1
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
520.9
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
519.5
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
519.3
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
518.5
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
517.6
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
517.0
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
515.4
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
514.7
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
513.7
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
511.5
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
509.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
509.2
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
509.2
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
506.3
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
505.4
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
503.8
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
497.4
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
496.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
496.0
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
494.9
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
492.9
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
492.0
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
491.7
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
486.9
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
484.4
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
482.6
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
471.3
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
465.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
464.6
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
463.2
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
460.7
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
457.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
455.2
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
452.1
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
450.4
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
449.9
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
442.9
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
441.1
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
440.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
440.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
439.6
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
438.4
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
438.3
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
437.3
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
436.2
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
432.5
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
431.1
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
429.5
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
429.3
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
429.1
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
428.2
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
426.8
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
424.1
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
423.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
423.2
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
421.9
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
419.4
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
417.8
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
414.9
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
413.3
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
411.8
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
407.2
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
405.1
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
401.5
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
397.3
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
396.2
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
391.1
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
390.5
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
388.5
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
386.7
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
380.1
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
375.0
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
372.8
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
372.4
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
370.0
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
358.7
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
351.4
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
348.8
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
566.6
Mouse sample
Sample description
nTPM
Midbrain nTPM: 566.6
Samples: 4
Max nTPM: 573.6
Min nTPM: 555.0
Sample A
Male
573.6
Sample B
Male
571.9
Sample C
Female
565.8
Sample D
Female
555.0
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.