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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
165.4
nTPM
FANTOM5:
426.2
Scaled Tags Per Million
Pig:
96.8
nTPM
Allen mouse:
2.7
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
165.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 165.2
2188
Female, age 91, both hemispheres
195.9
2301
Female, age 85, both hemispheres
194.8
2090
Male, age 80, both hemispheres
179.0
1984
Male, age 76, both hemispheres
91.0
Dorsal cochlear nucleus nTPM: 135.8
2378
Male, age 80, both hemispheres
186.5
2802
Male, age 74, right hemisphere
138.8
2187
Female, age 91, both hemispheres
134.0
2058
Male, age 76, both hemispheres
117.3
2370
Male, age 61, both hemispheres
102.3
Dorsal tegmental nucleus nTPM: 121.3
2083
Male, age 80, both hemispheres
156.7
2326
Male, age 74, both hemispheres
138.5
1936
Male, age 76, left hemisphere
112.0
2358
Male, age 61, both hemispheres
78.0
Dorsolateral tegmental area nTPM: 131.3
2751
Female, age 85, both hemispheres
184.8
2654
Male, age 80, both hemispheres
160.4
2337
Male, age 61, both hemispheres
128.0
2360
Male, age 74, both hemispheres
97.3
2141
Male, age 76, both hemispheres
85.9
Kolliker-Fuse nucleus nTPM: 165.4
2793
Female, age 91, left hemisphere
188.2
2315
Male, age 76, right hemisphere
158.8
2163
Male, age 80, both hemispheres
149.1
Lateral lemniscal nuclei nTPM: 136.8
2036
Male, age 80, both hemispheres
164.9
2320
Female, age 91, left hemisphere
153.5
2746
Female, age 85, left hemisphere
139.3
2453
Male, age 74, right hemisphere
124.2
2169
Male, age 76, both hemispheres
102.3
Lateral parabrachial nucleus nTPM: 158.5
2792
Male, age 76, both hemispheres
229.9
2013
Male, age 80, both hemispheres
164.2
2139
Female, age 85, right hemisphere
126.6
2790
Male, age 61, both hemispheres
113.2
Lateral vestibular nucleus nTPM: 135.1
2184
Male, age 76, both hemispheres
135.6
2311
Male, age 80, both hemispheres
134.6
Locus coeruleus nTPM: 76.9
2162
Male, age 80, both hemispheres
88.5
2317
Female, age 72, unknown
88.1
2720
Male, age 74, both hemispheres
82.0
2788
Male, age 74, unknown
72.8
2014
Male, age 55, unknown
70.0
2123
Female, age 91, both hemispheres
69.8
1980
Male, age 76, both hemispheres
67.1
Medial parabrachial nucleus nTPM: 128.7
2463
Female, age 85, right hemisphere
150.0
2854
Male, age 80, both hemispheres
144.9
2170
Female, age 91, both hemispheres
130.7
2786
Male, age 76, both hemispheres
117.1
2156
Male, age 61, both hemispheres
100.9
Medial periolivary nuclei nTPM: 143.3
2791
Male, age 74, right hemisphere
194.6
2081
Male, age 80, both hemispheres
169.9
2458
Female, age 91, both hemispheres
140.8
2063
Male, age 76, both hemispheres
118.7
2171
Female, age 85, both hemispheres
92.7
Motor facial nucleus nTPM: 144.9
2365
Male, age 74, right hemisphere
187.3
2697
Female, age 85, both hemispheres
175.8
2126
Male, age 61, both hemispheres
152.5
2795
Female, age 91, both hemispheres
139.1
2327
Male, age 80, both hemispheres
110.3
2062
Male, age 76, both hemispheres
104.5
Motor trigeminal nucleus nTPM: 123.6
2560
Male, age 74, both hemispheres
144.3
2079
Male, age 80, both hemispheres
125.4
2321
Female, age 91, both hemispheres
123.7
2309
Male, age 76, both hemispheres
115.9
2335
Male, age 61, both hemispheres
108.7
Nuclei of the trapezoid body nTPM: 123.4
2166
Male, age 80, both hemispheres
156.0
2368
Female, age 91, both hemispheres
141.2
1983
Male, age 76, both hemispheres
123.8
2159
Male, age 61, both hemispheres
110.9
2735
Female, age 85, both hemispheres
84.9
Nucleus raphe magnus nTPM: 120.8
2051
Male, age 76, both hemispheres
149.0
2455
Male, age 74, both hemispheres
142.6
2459
Female, age 91, both hemispheres
142.5
2328
Male, age 80, both hemispheres
139.5
2160
Male, age 61, both hemispheres
84.8
2172
Female, age 85, both hemispheres
66.7
Paramedian reticular nucleus nTPM: 134.2
2057
Male, age 80, both hemispheres
148.1
2052
Male, age 76, both hemispheres
141.9
2050
Female, age 85, both hemispheres
132.1
2313
Male, age 61, both hemispheres
114.7
Pedunculopontine tegmental nucleus nTPM: 119.8
2334
Male, age 80, both hemispheres
136.5
2338
Male, age 61, both hemispheres
113.0
1921
Female, age 85, both hemispheres
110.1
Pontine nuclei nTPM: 144.6
2454
Male, age 74, left hemisphere
224.5
2319
Female, age 91, both hemispheres
174.6
2109
Female, age 72, unknown
173.1
1863
Male, age 55, unknown
139.2
2115
Male, age 80, left hemisphere
132.5
1968
Male, age 76, left hemisphere
113.8
2727
Male, age 61, right hemisphere
106.4
2787
Female, age 85, both hemispheres
93.1
Pontine raphe nucleus nTPM: 103.9
2853
Male, age 76, midline
106.3
2122
Female, age 85, midline
101.6
Posteroventral cochlear nucleus nTPM: 162.6
2135
Female, age 91, both hemispheres
237.2
2341
Male, age 80, both hemispheres
208.4
2070
Male, age 76, both hemispheres
137.5
2371
Male, age 61, both hemispheres
124.7
2752
Female, age 85, both hemispheres
105.0
Principal sensory trigeminal nucleus nTPM: 119.4
2367
Female, age 91, left hemisphere
154.7
2324
Male, age 76, both hemispheres
124.9
2008
Male, age 80, left hemisphere
109.9
2158
Male, age 61, both hemispheres
88.1
Reticular pontine nucleus, caudal nTPM: 149.2
2559
Male, age 74, both hemispheres
179.4
2457
Female, age 91, both hemispheres
166.7
2092
Male, age 76, both hemispheres
150.3
2332
Male, age 80, right hemisphere
100.2
Reticular pontine nucleus, oral nTPM: 156.1
2366
Female, age 91, both hemispheres
180.2
2361
Male, age 74, both hemispheres
169.2
1939
Male, age 80, both hemispheres
157.8
2012
Female, age 85, both hemispheres
143.1
2167
Male, age 76, both hemispheres
129.9
Reticulotegmental nucleus nTPM: 112.4
2333
Male, age 80, both hemispheres
131.1
2322
Female, age 91, both hemispheres
119.2
2452
Male, age 74, both hemispheres
113.5
2325
Male, age 76, both hemispheres
85.8
Spinal trigeminal nucleus, oral nTPM: 125.4
2164
Male, age 80, both hemispheres
148.2
1978
Male, age 76, both hemispheres
118.0
2737
Female, age 85, both hemispheres
110.0
Subcoeruleus area nTPM: 123.1
2369
Female, age 85, left hemisphere
213.2
1958
Male, age 80, both hemispheres
123.9
2089
Male, age 76, left hemisphere
97.6
2323
Female, age 91, left hemisphere
90.7
2451
Male, age 74, both hemispheres
90.4
Superior olive nTPM: 153.9
2364
Male, age 74, right hemisphere
196.4
2020
Male, age 76, both hemispheres
157.0
2329
Male, age 80, right hemisphere
141.2
2561
Female, age 91, both hemispheres
139.6
1875
Female, age 85, both hemispheres
135.4
Ventral periolivary nuclei nTPM: 139.5
2023
Male, age 76, both hemispheres
202.2
2165
Male, age 80, both hemispheres
140.3
2794
Female, age 91, left hemisphere
110.2
2130
Female, age 85, both hemispheres
105.2
Ventrolateral tegmental area, A5 NE cell group nTPM: 149.2
2840
Female, age 85, both hemispheres
161.1
2456
Female, age 91, both hemispheres
152.7
2359
Male, age 61, both hemispheres
148.6
2161
Male, age 80, both hemispheres
148.0
1959
Male, age 76, both hemispheres
145.8
2449
Male, age 74, both hemispheres
139.3
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
96.8
Pig sample
Sample description
nTPM
Pons nTPM: 96.8
Samples: 4
Max nTPM: 138.2
Min nTPM: 73.2
Sample A
Female
73.2
Sample B
Female
74.1
Sample C
Male
101.8
Sample D
Male
138.2
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
