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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
500.1
nTPM
FANTOM5:
780.9
Scaled Tags Per Million
Pig:
494.9
nTPM
Allen mouse:
14.0
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
500.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 325.1
1984
Male, age 76, both hemispheres
466.1
2301
Female, age 85, both hemispheres
326.9
2090
Male, age 80, both hemispheres
297.8
2188
Female, age 91, both hemispheres
209.4
Dorsal cochlear nucleus nTPM: 366.7
2370
Male, age 61, both hemispheres
444.3
2058
Male, age 76, both hemispheres
370.5
2187
Female, age 91, both hemispheres
366.5
2802
Male, age 74, right hemisphere
335.9
2378
Male, age 80, both hemispheres
316.0
Dorsal tegmental nucleus nTPM: 383.9
2083
Male, age 80, both hemispheres
446.4
1936
Male, age 76, left hemisphere
415.7
2326
Male, age 74, both hemispheres
352.5
2358
Male, age 61, both hemispheres
321.1
Dorsolateral tegmental area nTPM: 407.7
2360
Male, age 74, both hemispheres
511.5
2654
Male, age 80, both hemispheres
466.3
2751
Female, age 85, both hemispheres
445.4
2141
Male, age 76, both hemispheres
425.6
2337
Male, age 61, both hemispheres
189.8
Kolliker-Fuse nucleus nTPM: 415.5
2315
Male, age 76, right hemisphere
714.6
2163
Male, age 80, both hemispheres
352.2
2793
Female, age 91, left hemisphere
179.6
Lateral lemniscal nuclei nTPM: 265.6
2169
Male, age 76, both hemispheres
394.0
2746
Female, age 85, left hemisphere
297.0
2036
Male, age 80, both hemispheres
274.1
2453
Male, age 74, right hemisphere
205.4
2320
Female, age 91, left hemisphere
157.6
Lateral parabrachial nucleus nTPM: 401.8
2139
Female, age 85, right hemisphere
490.5
2792
Male, age 76, both hemispheres
413.5
2013
Male, age 80, both hemispheres
390.2
2790
Male, age 61, both hemispheres
313.0
Lateral vestibular nucleus nTPM: 373.8
2184
Male, age 76, both hemispheres
383.0
2311
Male, age 80, both hemispheres
364.5
Locus coeruleus nTPM: 500.1
2123
Female, age 91, both hemispheres
622.6
2788
Male, age 74, unknown
559.5
2317
Female, age 72, unknown
530.8
2014
Male, age 55, unknown
529.0
1980
Male, age 76, both hemispheres
493.2
2162
Male, age 80, both hemispheres
393.5
2720
Male, age 74, both hemispheres
372.4
Medial parabrachial nucleus nTPM: 390.6
2463
Female, age 85, right hemisphere
465.9
2170
Female, age 91, both hemispheres
403.0
2786
Male, age 76, both hemispheres
386.8
2156
Male, age 61, both hemispheres
377.7
2854
Male, age 80, both hemispheres
319.7
Medial periolivary nuclei nTPM: 299.2
2063
Male, age 76, both hemispheres
403.5
2791
Male, age 74, right hemisphere
379.2
2171
Female, age 85, both hemispheres
340.8
2458
Female, age 91, both hemispheres
189.5
2081
Male, age 80, both hemispheres
183.0
Motor facial nucleus nTPM: 307.3
2062
Male, age 76, both hemispheres
468.8
2795
Female, age 91, both hemispheres
371.3
2365
Male, age 74, right hemisphere
321.3
2126
Male, age 61, both hemispheres
274.7
2697
Female, age 85, both hemispheres
225.4
2327
Male, age 80, both hemispheres
182.4
Motor trigeminal nucleus nTPM: 247.4
2309
Male, age 76, both hemispheres
353.2
2335
Male, age 61, both hemispheres
304.5
2079
Male, age 80, both hemispheres
226.7
2321
Female, age 91, both hemispheres
183.1
2560
Male, age 74, both hemispheres
169.6
Nuclei of the trapezoid body nTPM: 329.7
1983
Male, age 76, both hemispheres
428.0
2735
Female, age 85, both hemispheres
358.6
2159
Male, age 61, both hemispheres
353.8
2368
Female, age 91, both hemispheres
285.2
2166
Male, age 80, both hemispheres
222.7
Nucleus raphe magnus nTPM: 299.6
2455
Male, age 74, both hemispheres
382.7
2160
Male, age 61, both hemispheres
353.0
2051
Male, age 76, both hemispheres
337.8
2172
Female, age 85, both hemispheres
268.4
2328
Male, age 80, both hemispheres
245.6
2459
Female, age 91, both hemispheres
210.1
Paramedian reticular nucleus nTPM: 383.9
2057
Male, age 80, both hemispheres
415.3
2050
Female, age 85, both hemispheres
382.8
2052
Male, age 76, both hemispheres
379.8
2313
Male, age 61, both hemispheres
357.7
Pedunculopontine tegmental nucleus nTPM: 427.5
1921
Female, age 85, both hemispheres
583.4
2334
Male, age 80, both hemispheres
431.7
2338
Male, age 61, both hemispheres
267.5
Pontine nuclei nTPM: 282.5
1863
Male, age 55, unknown
436.7
1968
Male, age 76, left hemisphere
351.4
2787
Female, age 85, both hemispheres
336.1
2727
Male, age 61, right hemisphere
303.3
2109
Female, age 72, unknown
287.4
2115
Male, age 80, left hemisphere
209.9
2319
Female, age 91, both hemispheres
180.8
2454
Male, age 74, left hemisphere
154.7
Pontine raphe nucleus nTPM: 436.5
2853
Male, age 76, midline
491.1
2122
Female, age 85, midline
382.0
Posteroventral cochlear nucleus nTPM: 332.9
2752
Female, age 85, both hemispheres
427.4
2371
Male, age 61, both hemispheres
396.7
2070
Male, age 76, both hemispheres
386.7
2341
Male, age 80, both hemispheres
272.4
2135
Female, age 91, both hemispheres
181.1
Principal sensory trigeminal nucleus nTPM: 291.5
2324
Male, age 76, both hemispheres
401.0
2158
Male, age 61, both hemispheres
324.5
2008
Male, age 80, left hemisphere
282.2
2367
Female, age 91, left hemisphere
158.3
Reticular pontine nucleus, caudal nTPM: 244.8
2092
Male, age 76, both hemispheres
379.3
2332
Male, age 80, right hemisphere
212.0
2457
Female, age 91, both hemispheres
203.7
2559
Male, age 74, both hemispheres
184.1
Reticular pontine nucleus, oral nTPM: 348.8
1939
Male, age 80, both hemispheres
505.8
2167
Male, age 76, both hemispheres
426.1
2012
Female, age 85, both hemispheres
420.3
2361
Male, age 74, both hemispheres
197.0
2366
Female, age 91, both hemispheres
194.6
Reticulotegmental nucleus nTPM: 314.1
2325
Male, age 76, both hemispheres
381.9
2333
Male, age 80, both hemispheres
336.6
2322
Female, age 91, both hemispheres
329.4
2452
Male, age 74, both hemispheres
208.6
Spinal trigeminal nucleus, oral nTPM: 372.6
2737
Female, age 85, both hemispheres
451.1
1978
Male, age 76, both hemispheres
406.5
2164
Male, age 80, both hemispheres
260.3
Subcoeruleus area nTPM: 374.1
2323
Female, age 91, left hemisphere
444.7
2369
Female, age 85, left hemisphere
424.9
1958
Male, age 80, both hemispheres
401.0
2089
Male, age 76, left hemisphere
311.1
2451
Male, age 74, both hemispheres
288.8
Superior olive nTPM: 306.4
2364
Male, age 74, right hemisphere
405.0
2020
Male, age 76, both hemispheres
360.1
1875
Female, age 85, both hemispheres
353.1
2561
Female, age 91, both hemispheres
210.6
2329
Male, age 80, right hemisphere
203.3
Ventral periolivary nuclei nTPM: 299.0
2130
Female, age 85, both hemispheres
354.4
2023
Male, age 76, both hemispheres
341.3
2165
Male, age 80, both hemispheres
308.6
2794
Female, age 91, left hemisphere
191.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 302.0
2359
Male, age 61, both hemispheres
411.2
1959
Male, age 76, both hemispheres
361.0
2840
Female, age 85, both hemispheres
342.2
2449
Male, age 74, both hemispheres
256.4
2161
Male, age 80, both hemispheres
234.8
2456
Female, age 91, both hemispheres
206.4
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
494.9
Pig sample
Sample description
nTPM
Pons nTPM: 494.9
Samples: 4
Max nTPM: 519.4
Min nTPM: 461.9
Sample A
Female
512.1
Sample B
Female
461.9
Sample C
Male
486.1
Sample D
Male
519.4
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
