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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
718.7
nTPM
GTEx:
718.7
nTPM
FANTOM5:
229.6
Scaled Tags Per Million
Pig:
198.0
nTPM
Mouse:
1994.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
718.7
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 718.7
Samples: 105
Max nTPM: 1109.6
Min nTPM: 429.2
Std nTPM: 131.3
Median nTPM:
405_1
91 years, male
1109.6
526_1
61 years, male
995.9
518_1
75 years, female
978.9
375_1
74 years, female
972.7
229_1
69 years, female
959.9
386_1
76 years, male
959.0
322_1
76 years, male
953.6
414_1
84 years, female
941.4
246_1
77 years, male
927.2
237_1
82 years, male
914.3
251_1
78 years, male
891.2
377_1
82 years, female
873.6
321_1
62 years, female
855.3
389_1
86 years, female
853.7
6_1
73 years, female
849.0
217_1
76 years, male
845.3
324_1
76 years, male
843.7
425_1
59 years, female
839.4
415_1
77 years, female
837.4
352_1
62 years, male
835.7
172_1
72 years, female
822.5
316_1
62 years, male
818.6
81_1
67 years, male
812.0
266_1
85 years, male
801.1
406_1
79 years, male
801.1
379_1
60 years, male
797.4
347_1
72 years, male
792.5
189_1
76 years, male
792.3
468_1
89 years, male
787.0
126_1
63 years, male
784.4
117_1
61 years, male
776.1
413_1
59 years, female
774.5
319_1
81 years, male
771.5
142_1
61 years, female
769.7
348_1
84 years, male
767.9
466_1
57 years, female
765.9
490_1
67 years, female
763.1
35_1
74 years, female
762.0
9_1
66 years, female
761.8
318_1
68 years, male
761.3
447_1
81 years, male
760.5
18_1
88 years, male
756.1
480_1
63 years, male
752.7
376_1
75 years, female
749.5
313_1
79 years, female
748.4
315_1
62 years, female
744.4
32_1
67 years, male
735.0
320_1
89 years, female
731.5
43_1
64 years, female
722.0
218_1
71 years, female
717.8
396_1
62 years, male
717.2
291_1
76 years, male
715.4
254_1
77 years, female
712.5
495_1
57 years, female
705.7
243_1
75 years, male
704.1
162_1
79 years, female
700.0
153_1
70 years, female
698.5
292_1
71 years, male
698.4
499_1
55 years, female
698.0
286_1
68 years, female
697.6
404_1
82 years, female
697.5
163_1
78 years, male
690.5
265_1
87 years, male
689.3
355_1
70 years, female
686.5
311_1
78 years, male
685.6
177_1
74 years, male
682.6
354_1
81 years, female
677.7
307_1
66 years, female
677.3
149_1
88 years, male
676.7
503_1
68 years, male
675.2
115_1
83 years, male
666.3
2_1
77 years, female
660.0
173_1
67 years, male
657.9
335_1
73 years, female
653.0
384_1
83 years, male
650.6
99_1
64 years, male
647.3
139_1
64 years, female
642.4
137_1
83 years, male
639.9
353_1
82 years, female
630.8
517_1
88 years, male
627.9
145_1
84 years, male
626.5
4_1
88 years, female
613.4
349_1
83 years, male
613.1
356_1
87 years, female
612.8
501_1
88 years, male
612.8
491_1
89 years, female
612.0
264_1
73 years, female
611.7
506_1
65 years, male
606.4
120_1
70 years, female
591.4
350_1
84 years, female
580.0
351_1
91 years, male
578.5
17_1
71 years, male
577.5
394_1
75 years, female
562.8
288_1
66 years, female
561.9
293_1
68 years, female
553.5
89_1
63 years, male
547.5
317_1
60 years, male
529.8
109_1
81 years, female
517.6
119_1
70 years, female
509.4
295_1
61 years, female
480.0
314_1
67 years, male
466.9
42_1
85 years, male
465.4
41_1
94 years, female
452.1
308_1
70 years, female
452.1
452_1
88 years, female
429.2
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.