HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:1534.9 nTPM
HPA Brain:233.1 nTPM
GTEx:1534.9 nTPM
FANTOM5:38.2 Scaled Tags Per Million
Pig:469.9 nTPM
Mouse:658.5 nTPM
Allen mouse:4.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035139
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 233.1
Sample id Sample description nTPM
Hippocampus
nTPM: 220.1
1898 Male, age 80, left hemisphere 267.6
2529 Female, age 94, left hemisphere 245.6
2621 Female, age 67, right hemisphere 223.5
1911 Female, age 85, right hemisphere 212.3
1855 Male, age 76, left hemisphere 196.4
2148 Female, age 91, left hemisphere 175.3
Dentate gyrus
nTPM: 218.3
2530 Female, age 94, left hemisphere 276.7
2010 Male, age 76, both hemispheres 226.0
1927 Female, age 91, both hemispheres 218.0
2528 Male, age 74, both hemispheres 198.3
2531 Female, age 67, both hemispheres 195.4
2246 Female, age 85, both hemispheres 195.2
Entorhinal gyrus
nTPM: 211.8
2686 Male, age 75, right hemisphere 259.0
2764 Male, age 80, right hemisphere 225.6
1938 Female, age 85, left hemisphere 223.0
2117 Female, age 91, right hemisphere 210.8
1787 Male, age 76, left hemisphere 198.0
2613 Female, age 94, left hemisphere 154.4
Hippocampus, CA1
nTPM: 206.1
2082 Female, age 91, right hemisphere 232.4
1873 Female, age 85, both hemispheres 217.6
2045 Male, age 76, both hemispheres 203.8
2749 Male, age 80, left hemisphere 200.5
2527 Male, age 74, both hemispheres 176.5
Hippocampus, CA2
nTPM: 233.1
1963 Male, age 80, left hemisphere 276.6
1892 Male, age 76, both hemispheres 272.8
2437 Female, age 94, left hemisphere 240.8
1940 Female, age 85, left hemisphere 207.7
2113 Female, age 91, right hemisphere 201.8
2249 Male, age 74, both hemispheres 198.9
Hippocampus, CA3
nTPM: 188.8
1867 Male, age 76, both hemispheres 259.6
1891 Female, age 85, both hemispheres 238.6
2137 Male, age 80, left hemisphere 186.2
2861 Female, age 67, both hemispheres 175.2
2436 Male, age 74, both hemispheres 164.5
2620 Female, age 94, left hemisphere 108.8
Parahippocampal cortex
nTPM: 204.9
2018 Male, age 76, both hemispheres 277.4
1850 Male, age 80, both hemispheres 231.6
2250 Female, age 67, right hemisphere 224.2
1933 Female, age 85, both hemispheres 220.1
1990 Female, age 91, right hemisphere 217.3
2532 Female, age 72, left hemisphere 192.3
2245 Female, age 91, both hemispheres 185.8
2693 Female, age 94, both hemispheres 175.8
2692 Male, age 74, both hemispheres 175.7
2622 Female, age 67, right hemisphere 149.3
Perirhinal gyrus
nTPM: 229.0
1841 Female, age 85, right hemisphere 271.0
1847 Female, age 91, left hemisphere 246.5
2848 Male, age 76, right hemisphere 221.4
1794 Male, age 80, right hemisphere 219.8
2521 Female, age 94, right hemisphere 186.5
Subiculum
nTPM: 220.2
2438 Female, age 94, left hemisphere 255.2
1977 Female, age 85, both hemispheres 242.3
2042 Male, age 76, both hemispheres 238.8
1901 Male, age 80, both hemispheres 221.7
2729 Female, age 91, right hemisphere 202.3
2619 Male, age 74, both hemispheres 160.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1534.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1534.9
Samples: 197

Max nTPM: 5980.6
Min nTPM: 498.9
Std nTPM: 640.4
Median nTPM: 1397.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 5980.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3879.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 3651.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 3536.7
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 3364.3
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 3012.4
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2914.6
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2818.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2818.0
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 2600.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 2523.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 38.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 38.2
FF:10169-103B7 60 years, female 54.0
FF:10153-102I9 76 years, female 22.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 469.9
Pig sample Sample description nTPM
Subiculum
nTPM: 407.3
Samples: 4

Max nTPM: 583.5
Min nTPM: 306.3
Sample A Female 583.5
Sample B Female 400.0
Sample C Male 306.3
Sample D Male 339.5
Dorsal hippocampus
nTPM: 469.9
Samples: 4

Max nTPM: 654.0
Min nTPM: 336.2
Sample A Female 654.0
Sample B Female 413.4
Sample C Male 476.0
Sample D Male 336.2
Entorhinal cortex
nTPM: 389.1
Samples: 4

Max nTPM: 505.9
Min nTPM: 283.3
Sample A Female 322.7
Sample B Female 505.9
Sample C Male 444.5
Sample D Male 283.3
Ventral hippocampus
nTPM: 393.3
Samples: 4

Max nTPM: 449.2
Min nTPM: 371.3
Sample A Female 449.2
Sample B Female 371.3
Sample C Male 377.8
Sample D Male 374.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 658.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 635.5
Samples: 4

Max nTPM: 699.6
Min nTPM: 599.3
Sample A Male 613.6
Sample B Male 629.6
Sample C Female 699.6
Sample D Female 599.3
Hippocampal formation
nTPM: 658.5
Samples: 4

Max nTPM: 733.9
Min nTPM: 588.4
Sample A Male 733.9
Sample B Male 588.4
Sample C Female 652.7
Sample D Female 659.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.0
68744869 Antisense, RP_050208_01_G10, Mouse strain C57BL/6J (56 days, male) 4.0

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