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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
425.3
nTPM
GTEx:
425.3
nTPM
FANTOM5:
23.1
Scaled Tags Per Million
Pig:
164.6
nTPM
Mouse:
960.8
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
425.3
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 425.3
Samples: 105
Max nTPM: 599.8
Min nTPM: 286.6
Std nTPM: 71.9
Median nTPM: 0.0
17_1
71 years, male
599.8
35_1
74 years, female
590.7
120_1
70 years, female
570.4
379_1
60 years, male
561.2
501_1
88 years, male
549.1
491_1
89 years, female
546.5
375_1
74 years, female
541.4
4_1
88 years, female
537.6
384_1
83 years, male
537.2
495_1
57 years, female
535.9
389_1
86 years, female
526.8
153_1
70 years, female
522.4
42_1
85 years, male
521.8
142_1
61 years, female
517.5
162_1
79 years, female
515.5
145_1
84 years, male
510.2
307_1
66 years, female
509.5
139_1
64 years, female
508.5
321_1
62 years, female
496.2
126_1
63 years, male
495.7
137_1
83 years, male
490.2
237_1
82 years, male
484.3
396_1
62 years, male
481.4
526_1
61 years, male
477.5
119_1
70 years, female
472.6
466_1
57 years, female
471.5
218_1
71 years, female
470.6
499_1
55 years, female
468.4
308_1
70 years, female
465.5
117_1
61 years, male
464.5
452_1
88 years, female
462.7
518_1
75 years, female
461.7
376_1
75 years, female
460.7
322_1
76 years, male
459.0
377_1
82 years, female
457.3
315_1
62 years, female
456.6
414_1
84 years, female
455.9
311_1
78 years, male
453.7
490_1
67 years, female
453.3
217_1
76 years, male
453.1
109_1
81 years, female
446.7
89_1
63 years, male
439.8
246_1
77 years, male
439.4
2_1
77 years, female
438.1
265_1
87 years, male
437.6
355_1
70 years, female
436.0
6_1
73 years, female
435.8
386_1
76 years, male
430.5
320_1
89 years, female
429.7
18_1
88 years, male
429.5
347_1
72 years, male
428.7
447_1
81 years, male
425.5
288_1
66 years, female
425.4
394_1
75 years, female
423.0
468_1
89 years, male
422.7
99_1
64 years, male
421.7
189_1
76 years, male
420.9
415_1
77 years, female
417.2
319_1
81 years, male
415.8
173_1
67 years, male
414.8
503_1
68 years, male
406.3
348_1
84 years, male
404.7
43_1
64 years, female
396.5
405_1
91 years, male
396.5
404_1
82 years, female
392.7
314_1
67 years, male
391.3
413_1
59 years, female
389.2
32_1
67 years, male
389.0
295_1
61 years, female
386.5
517_1
88 years, male
386.2
506_1
65 years, male
386.1
266_1
85 years, male
385.3
254_1
77 years, female
383.2
149_1
88 years, male
379.9
81_1
67 years, male
376.4
324_1
76 years, male
373.9
354_1
81 years, female
370.8
264_1
73 years, female
370.4
351_1
91 years, male
367.5
41_1
94 years, female
364.6
335_1
73 years, female
363.4
243_1
75 years, male
360.9
349_1
83 years, male
359.6
115_1
83 years, male
358.6
317_1
60 years, male
356.4
316_1
62 years, male
354.5
313_1
79 years, female
354.4
177_1
74 years, male
351.2
480_1
63 years, male
346.8
353_1
82 years, female
341.8
229_1
69 years, female
341.5
286_1
68 years, female
340.2
406_1
79 years, male
340.1
291_1
76 years, male
336.5
318_1
68 years, male
335.8
251_1
78 years, male
335.7
9_1
66 years, female
334.1
172_1
72 years, female
332.1
425_1
59 years, female
312.7
350_1
84 years, female
309.0
356_1
87 years, female
308.1
352_1
62 years, male
306.2
292_1
71 years, male
303.1
163_1
78 years, male
301.0
293_1
68 years, female
286.6
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.