HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:18.5 nTPM
HPA Brain:39.6 nTPM
GTEx:18.5 nTPM
FANTOM5:21.7 Scaled Tags Per Million
Pig:29.1 nTPM
Mouse:39.3 nTPM
Allen mouse:3.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA049890Antibody HPA049986
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 39.6
Sample id Sample description nTPM
Hippocampus
nTPM: 32.6
2621 Female, age 67, right hemisphere 34.2
1855 Male, age 76, left hemisphere 34.1
2148 Female, age 91, left hemisphere 34.1
2529 Female, age 94, left hemisphere 33.7
1898 Male, age 80, left hemisphere 31.9
1911 Female, age 85, right hemisphere 27.4
Dentate gyrus
nTPM: 36.5
2531 Female, age 67, both hemispheres 55.9
2528 Male, age 74, both hemispheres 38.2
2530 Female, age 94, left hemisphere 35.9
2246 Female, age 85, both hemispheres 32.0
2010 Male, age 76, both hemispheres 31.6
1927 Female, age 91, both hemispheres 25.4
Entorhinal gyrus
nTPM: 29.3
1787 Male, age 76, left hemisphere 33.8
2117 Female, age 91, right hemisphere 32.6
2764 Male, age 80, right hemisphere 29.5
1938 Female, age 85, left hemisphere 28.2
2613 Female, age 94, left hemisphere 28.1
2686 Male, age 75, right hemisphere 23.3
Hippocampus, CA1
nTPM: 30.4
1873 Female, age 85, both hemispheres 38.3
2045 Male, age 76, both hemispheres 36.7
2527 Male, age 74, both hemispheres 28.1
2082 Female, age 91, right hemisphere 24.7
2749 Male, age 80, left hemisphere 24.3
Hippocampus, CA2
nTPM: 25.5
1963 Male, age 80, left hemisphere 30.5
2113 Female, age 91, right hemisphere 26.5
2249 Male, age 74, both hemispheres 26.2
2437 Female, age 94, left hemisphere 25.1
1892 Male, age 76, both hemispheres 25.0
1940 Female, age 85, left hemisphere 19.8
Hippocampus, CA3
nTPM: 39.6
2620 Female, age 94, left hemisphere 73.0
2861 Female, age 67, both hemispheres 49.4
1891 Female, age 85, both hemispheres 36.1
2436 Male, age 74, both hemispheres 30.3
1867 Male, age 76, both hemispheres 28.2
2137 Male, age 80, left hemisphere 20.7
Parahippocampal cortex
nTPM: 23.5
2692 Male, age 74, both hemispheres 28.4
1990 Female, age 91, right hemisphere 26.8
1933 Female, age 85, both hemispheres 25.6
1850 Male, age 80, both hemispheres 24.4
2018 Male, age 76, both hemispheres 24.2
2245 Female, age 91, both hemispheres 23.2
2532 Female, age 72, left hemisphere 21.9
2250 Female, age 67, right hemisphere 21.8
2693 Female, age 94, both hemispheres 20.7
2622 Female, age 67, right hemisphere 18.3
Perirhinal gyrus
nTPM: 22.8
1847 Female, age 91, left hemisphere 25.1
1794 Male, age 80, right hemisphere 25.0
2848 Male, age 76, right hemisphere 23.5
2521 Female, age 94, right hemisphere 22.0
1841 Female, age 85, right hemisphere 18.1
Subiculum
nTPM: 29.2
2729 Female, age 91, right hemisphere 34.7
2619 Male, age 74, both hemispheres 34.4
2042 Male, age 76, both hemispheres 29.9
1977 Female, age 85, both hemispheres 27.8
2438 Female, age 94, left hemisphere 25.0
1901 Male, age 80, both hemispheres 23.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 18.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 18.5
Samples: 197

Max nTPM: 42.9
Min nTPM: 7.6
Std nTPM: 6.8
Median nTPM: 17.1
GTEX-15ER7-0011-R1b-SM-7KUE1 20-29 years, female 42.9
GTEX-11ONC-0011-R1a-SM-57WD4 60-69 years, male 41.6
GTEX-1IY9M-0011-R1a-SM-EXURZ 60-69 years, male 39.4
GTEX-11GSP-0011-R1a-SM-9QEJ3 60-69 years, female 38.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 38.1
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 37.0
GTEX-1IKK5-0011-R1b-SM-CE6SQ 60-69 years, male 36.7
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 35.3
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 34.7
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 33.3
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 33.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 21.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 21.7
FF:10153-102I9 76 years, female 26.8
FF:10169-103B7 60 years, female 16.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.1
Pig sample Sample description nTPM
Subiculum
nTPM: 23.7
Samples: 4

Max nTPM: 32.2
Min nTPM: 19.5
Sample A Female 32.2
Sample B Female 19.5
Sample C Male 22.7
Sample D Male 20.4
Dorsal hippocampus
nTPM: 28.9
Samples: 4

Max nTPM: 38.4
Min nTPM: 18.2
Sample A Female 38.4
Sample B Female 30.3
Sample C Male 28.6
Sample D Male 18.2
Entorhinal cortex
nTPM: 23.0
Samples: 4

Max nTPM: 26.6
Min nTPM: 18.4
Sample A Female 26.6
Sample B Female 21.2
Sample C Male 25.6
Sample D Male 18.4
Ventral hippocampus
nTPM: 29.1
Samples: 4

Max nTPM: 34.4
Min nTPM: 19.3
Sample A Female 29.7
Sample B Female 19.3
Sample C Male 33.1
Sample D Male 34.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 39.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 22.5
Samples: 4

Max nTPM: 27.4
Min nTPM: 17.6
Sample A Male 22.7
Sample B Male 17.6
Sample C Female 27.4
Sample D Female 22.2
Hippocampal formation
nTPM: 39.2
Samples: 4

Max nTPM: 44.6
Min nTPM: 31.4
Sample A Male 31.4
Sample B Male 41.3
Sample C Female 44.6
Sample D Female 39.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 3.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.0
69671929 Antisense, RP_050428_02_F06, Mouse strain C57BL/6J (56 days, male) 3.0

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