HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:6.8 nTPM
HPA Brain:14.8 nTPM
GTEx:6.8 nTPM
FANTOM5:53.8 Scaled Tags Per Million
Pig:29.2 nTPM
Mouse:5.4 nTPM
Allen mouse:0.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.8
Sample id Sample description nTPM
Hippocampus
nTPM: 11.2
1898 Male, age 80, left hemisphere 11.9
1855 Male, age 76, left hemisphere 11.7
1911 Female, age 85, right hemisphere 11.3
2529 Female, age 94, left hemisphere 11.3
2148 Female, age 91, left hemisphere 10.8
2621 Female, age 67, right hemisphere 10.1
Dentate gyrus
nTPM: 11.3
1927 Female, age 91, both hemispheres 14.2
2246 Female, age 85, both hemispheres 11.2
2531 Female, age 67, both hemispheres 10.9
2010 Male, age 76, both hemispheres 10.8
2530 Female, age 94, left hemisphere 10.5
2528 Male, age 74, both hemispheres 10.0
Entorhinal gyrus
nTPM: 14.3
1938 Female, age 85, left hemisphere 17.6
1787 Male, age 76, left hemisphere 17.3
2613 Female, age 94, left hemisphere 15.8
2686 Male, age 75, right hemisphere 13.0
2764 Male, age 80, right hemisphere 12.2
2117 Female, age 91, right hemisphere 9.7
Hippocampus, CA1
nTPM: 12.9
2749 Male, age 80, left hemisphere 17.0
2082 Female, age 91, right hemisphere 14.6
1873 Female, age 85, both hemispheres 13.3
2527 Male, age 74, both hemispheres 10.0
2045 Male, age 76, both hemispheres 9.9
Hippocampus, CA2
nTPM: 12.8
2249 Male, age 74, both hemispheres 14.8
1892 Male, age 76, both hemispheres 13.5
2113 Female, age 91, right hemisphere 13.0
1963 Male, age 80, left hemisphere 11.9
1940 Female, age 85, left hemisphere 11.8
2437 Female, age 94, left hemisphere 11.7
Hippocampus, CA3
nTPM: 13.0
2137 Male, age 80, left hemisphere 19.0
2436 Male, age 74, both hemispheres 16.4
2620 Female, age 94, left hemisphere 12.1
2861 Female, age 67, both hemispheres 10.7
1891 Female, age 85, both hemispheres 10.2
1867 Male, age 76, both hemispheres 9.9
Parahippocampal cortex
nTPM: 13.2
1850 Male, age 80, both hemispheres 15.5
2693 Female, age 94, both hemispheres 15.5
1990 Female, age 91, right hemisphere 15.0
2250 Female, age 67, right hemisphere 14.8
1933 Female, age 85, both hemispheres 13.9
2245 Female, age 91, both hemispheres 13.2
2622 Female, age 67, right hemisphere 12.5
2692 Male, age 74, both hemispheres 11.9
2532 Female, age 72, left hemisphere 10.4
2018 Male, age 76, both hemispheres 9.1
Perirhinal gyrus
nTPM: 14.8
1847 Female, age 91, left hemisphere 16.0
2848 Male, age 76, right hemisphere 15.3
2521 Female, age 94, right hemisphere 15.2
1841 Female, age 85, right hemisphere 14.3
1794 Male, age 80, right hemisphere 13.1
Subiculum
nTPM: 11.1
1901 Male, age 80, both hemispheres 12.8
1977 Female, age 85, both hemispheres 12.7
2619 Male, age 74, both hemispheres 11.0
2042 Male, age 76, both hemispheres 10.6
2729 Female, age 91, right hemisphere 10.0
2438 Female, age 94, left hemisphere 9.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 6.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 6.8
Samples: 197

Max nTPM: 25.8
Min nTPM: 1.5
Std nTPM: 3.1
Median nTPM: 6.2
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 25.8
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 20.2
GTEX-17EVQ-0011-R1a-SM-7189S 70-79 years, male 16.9
GTEX-13OW7-0011-R1b-SM-5L3HF 50-59 years, male 16.6
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 15.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 14.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 14.2
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 14.2
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 12.9
GTEX-14E7W-0011-R1b-SM-5YYAT 70-79 years, male 12.8
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 12.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 53.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 53.8
FF:10169-103B7 60 years, female 62.3
FF:10153-102I9 76 years, female 45.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 29.2
Pig sample Sample description nTPM
Subiculum
nTPM: 22.5
Samples: 4

Max nTPM: 25.6
Min nTPM: 18.1
Sample A Female 24.5
Sample B Female 21.7
Sample C Male 18.1
Sample D Male 25.6
Dorsal hippocampus
nTPM: 24.5
Samples: 4

Max nTPM: 26.3
Min nTPM: 22.6
Sample A Female 23.6
Sample B Female 22.6
Sample C Male 25.5
Sample D Male 26.3
Entorhinal cortex
nTPM: 29.2
Samples: 4

Max nTPM: 31.5
Min nTPM: 26.2
Sample A Female 26.2
Sample B Female 31.0
Sample C Male 28.1
Sample D Male 31.5
Ventral hippocampus
nTPM: 21.5
Samples: 4

Max nTPM: 25.6
Min nTPM: 14.2
Sample A Female 23.8
Sample B Female 22.3
Sample C Male 14.2
Sample D Male 25.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 5.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 4.7
Samples: 4

Max nTPM: 5.1
Min nTPM: 4.4
Sample A Male 4.6
Sample B Male 5.1
Sample C Female 4.5
Sample D Female 4.4
Hippocampal formation
nTPM: 5.4
Samples: 4

Max nTPM: 5.8
Min nTPM: 4.9
Sample A Male 4.9
Sample B Male 5.5
Sample C Female 5.8
Sample D Female 5.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.9
69526492 Antisense, RP_050419_04_H12, Mouse strain C57BL/6J (56 days, male) 0.9

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