HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:21.2 nTPM
HPA Brain:110.3 nTPM
GTEx:21.2 nTPM
FANTOM5:197.3 Scaled Tags Per Million
Pig:130.2 nTPM
Mouse:56.2 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA024201Antibody HPA026644Antibody CAB004668
Glial cells Not detectedNot detectedMedium
Neuronal cells LowLowHigh







HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 110.3
Sample id Sample description nTPM
Hippocampus
nTPM: 95.2
1898 Male, age 80, left hemisphere 113.7
2529 Female, age 94, left hemisphere 108.7
1911 Female, age 85, right hemisphere 89.9
2621 Female, age 67, right hemisphere 89.2
2148 Female, age 91, left hemisphere 87.3
1855 Male, age 76, left hemisphere 82.4
Dentate gyrus
nTPM: 89.3
2528 Male, age 74, both hemispheres 97.5
2246 Female, age 85, both hemispheres 94.2
1927 Female, age 91, both hemispheres 93.6
2010 Male, age 76, both hemispheres 90.4
2530 Female, age 94, left hemisphere 80.0
2531 Female, age 67, both hemispheres 80.0
Entorhinal gyrus
nTPM: 87.2
1938 Female, age 85, left hemisphere 107.4
2764 Male, age 80, right hemisphere 91.3
1787 Male, age 76, left hemisphere 87.5
2117 Female, age 91, right hemisphere 87.2
2686 Male, age 75, right hemisphere 80.2
2613 Female, age 94, left hemisphere 69.9
Hippocampus, CA1
nTPM: 97.1
1873 Female, age 85, both hemispheres 106.4
2749 Male, age 80, left hemisphere 104.1
2527 Male, age 74, both hemispheres 101.0
2082 Female, age 91, right hemisphere 88.1
2045 Male, age 76, both hemispheres 86.1
Hippocampus, CA2
nTPM: 94.1
1892 Male, age 76, both hemispheres 105.7
2249 Male, age 74, both hemispheres 100.1
1963 Male, age 80, left hemisphere 93.7
1940 Female, age 85, left hemisphere 92.2
2113 Female, age 91, right hemisphere 90.0
2437 Female, age 94, left hemisphere 83.1
Hippocampus, CA3
nTPM: 91.0
2137 Male, age 80, left hemisphere 99.5
1891 Female, age 85, both hemispheres 98.8
1867 Male, age 76, both hemispheres 97.3
2436 Male, age 74, both hemispheres 93.3
2620 Female, age 94, left hemisphere 80.3
2861 Female, age 67, both hemispheres 77.1
Parahippocampal cortex
nTPM: 89.7
1850 Male, age 80, both hemispheres 120.5
1990 Female, age 91, right hemisphere 98.0
1933 Female, age 85, both hemispheres 97.1
2250 Female, age 67, right hemisphere 88.6
2245 Female, age 91, both hemispheres 87.9
2532 Female, age 72, left hemisphere 85.3
2692 Male, age 74, both hemispheres 85.0
2018 Male, age 76, both hemispheres 82.6
2693 Female, age 94, both hemispheres 82.6
2622 Female, age 67, right hemisphere 69.4
Perirhinal gyrus
nTPM: 110.3
1841 Female, age 85, right hemisphere 124.8
1794 Male, age 80, right hemisphere 117.9
1847 Female, age 91, left hemisphere 116.0
2848 Male, age 76, right hemisphere 98.9
2521 Female, age 94, right hemisphere 93.6
Subiculum
nTPM: 93.7
1977 Female, age 85, both hemispheres 103.5
1901 Male, age 80, both hemispheres 98.6
2438 Female, age 94, left hemisphere 97.6
2619 Male, age 74, both hemispheres 91.0
2729 Female, age 91, right hemisphere 89.1
2042 Male, age 76, both hemispheres 82.3

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 34.3
Min nTPM: 9.0
Std nTPM: 3.0
Median nTPM: 20.9
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 34.3
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 30.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.5
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 29.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 27.8
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 27.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 27.4
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 27.3
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 27.1
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 27.1
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 27.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 197.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 197.3
FF:10169-103B7 60 years, female 211.8
FF:10153-102I9 76 years, female 182.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 130.2
Pig sample Sample description nTPM
Subiculum
nTPM: 120.1
Samples: 4

Max nTPM: 146.5
Min nTPM: 109.2
Sample A Female 146.5
Sample B Female 114.4
Sample C Male 110.1
Sample D Male 109.2
Dorsal hippocampus
nTPM: 130.2
Samples: 4

Max nTPM: 143.0
Min nTPM: 107.8
Sample A Female 143.0
Sample B Female 136.1
Sample C Male 133.9
Sample D Male 107.8
Entorhinal cortex
nTPM: 119.1
Samples: 4

Max nTPM: 130.8
Min nTPM: 101.0
Sample A Female 120.2
Sample B Female 130.8
Sample C Male 124.3
Sample D Male 101.0
Ventral hippocampus
nTPM: 118.9
Samples: 4

Max nTPM: 125.4
Min nTPM: 111.3
Sample A Female 125.4
Sample B Female 111.3
Sample C Male 115.5
Sample D Male 123.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 56.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 56.2
Samples: 4

Max nTPM: 67.0
Min nTPM: 50.2
Sample A Male 54.4
Sample B Male 53.2
Sample C Female 50.2
Sample D Female 67.0
Hippocampal formation
nTPM: 52.3
Samples: 4

Max nTPM: 60.4
Min nTPM: 43.0
Sample A Male 48.6
Sample B Male 57.1
Sample C Female 60.4
Sample D Female 43.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
70445688 Antisense, RP_050614_04_D04, Mouse strain C57BL/6J (56 days, male) 15.4

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