HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:185.0 nTPM
HPA Brain:921.9 nTPM
GTEx:185.0 nTPM
FANTOM5:1215.3 Scaled Tags Per Million
Pig:908.1 nTPM
Mouse:595.8 nTPM
Allen mouse:15.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009172Antibody HPA067499Antibody CAB002574
Glial cells LowMediumMedium
Neuronal cells Not detectedNot detectedNot detected






HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 921.9
Sample id Sample description nTPM
Hippocampus
nTPM: 886.6
2148 Female, age 91, left hemisphere 1013.2
1911 Female, age 85, right hemisphere 907.9
2529 Female, age 94, left hemisphere 901.2
2621 Female, age 67, right hemisphere 855.3
1855 Male, age 76, left hemisphere 837.3
1898 Male, age 80, left hemisphere 804.5
Dentate gyrus
nTPM: 693.8
1927 Female, age 91, both hemispheres 949.8
2246 Female, age 85, both hemispheres 861.3
2528 Male, age 74, both hemispheres 723.1
2010 Male, age 76, both hemispheres 577.5
2530 Female, age 94, left hemisphere 555.3
2531 Female, age 67, both hemispheres 495.8
Entorhinal gyrus
nTPM: 761.8
1938 Female, age 85, left hemisphere 1243.5
2117 Female, age 91, right hemisphere 980.4
2686 Male, age 75, right hemisphere 608.0
2764 Male, age 80, right hemisphere 603.4
1787 Male, age 76, left hemisphere 591.4
2613 Female, age 94, left hemisphere 543.8
Hippocampus, CA1
nTPM: 833.0
2527 Male, age 74, both hemispheres 1252.1
1873 Female, age 85, both hemispheres 795.9
2749 Male, age 80, left hemisphere 744.7
2082 Female, age 91, right hemisphere 738.5
2045 Male, age 76, both hemispheres 634.1
Hippocampus, CA2
nTPM: 728.7
2249 Male, age 74, both hemispheres 888.4
2113 Female, age 91, right hemisphere 854.6
1940 Female, age 85, left hemisphere 706.4
1963 Male, age 80, left hemisphere 654.7
2437 Female, age 94, left hemisphere 647.3
1892 Male, age 76, both hemispheres 620.8
Hippocampus, CA3
nTPM: 727.0
2436 Male, age 74, both hemispheres 892.5
2861 Female, age 67, both hemispheres 859.7
1891 Female, age 85, both hemispheres 817.7
2137 Male, age 80, left hemisphere 680.1
1867 Male, age 76, both hemispheres 669.5
2620 Female, age 94, left hemisphere 442.4
Parahippocampal cortex
nTPM: 921.9
2692 Male, age 74, both hemispheres 1346.8
1933 Female, age 85, both hemispheres 1241.2
2250 Female, age 67, right hemisphere 1191.2
2622 Female, age 67, right hemisphere 1115.3
2245 Female, age 91, both hemispheres 871.1
1990 Female, age 91, right hemisphere 865.2
1850 Male, age 80, both hemispheres 755.0
2693 Female, age 94, both hemispheres 711.3
2532 Female, age 72, left hemisphere 602.4
2018 Male, age 76, both hemispheres 519.5
Perirhinal gyrus
nTPM: 780.8
1841 Female, age 85, right hemisphere 969.4
1847 Female, age 91, left hemisphere 961.2
1794 Male, age 80, right hemisphere 894.0
2521 Female, age 94, right hemisphere 637.7
2848 Male, age 76, right hemisphere 441.5
Subiculum
nTPM: 769.8
2619 Male, age 74, both hemispheres 1209.5
2729 Female, age 91, right hemisphere 1006.3
1977 Female, age 85, both hemispheres 755.4
2438 Female, age 94, left hemisphere 637.2
1901 Male, age 80, both hemispheres 569.1
2042 Male, age 76, both hemispheres 441.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 185.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 185.0
Samples: 197

Max nTPM: 680.7
Min nTPM: 15.9
Std nTPM: 129.2
Median nTPM: 157.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 680.7
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 624.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 589.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 569.5
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 533.6
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 514.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 485.8
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 474.6
GTEX-1GF9V-0011-R1a-SM-CKZNQ 60-69 years, male 469.0
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 462.6
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 435.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1215.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1215.3
FF:10169-103B7 60 years, female 1339.7
FF:10153-102I9 76 years, female 1090.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 908.1
Pig sample Sample description nTPM
Subiculum
nTPM: 908.1
Samples: 4

Max nTPM: 1002.8
Min nTPM: 764.4
Sample A Female 1002.8
Sample B Female 973.0
Sample C Male 892.1
Sample D Male 764.4
Dorsal hippocampus
nTPM: 674.8
Samples: 4

Max nTPM: 689.4
Min nTPM: 664.9
Sample A Female 665.5
Sample B Female 679.4
Sample C Male 689.4
Sample D Male 664.9
Entorhinal cortex
nTPM: 809.7
Samples: 4

Max nTPM: 965.0
Min nTPM: 672.7
Sample A Female 743.1
Sample B Female 857.9
Sample C Male 965.0
Sample D Male 672.7
Ventral hippocampus
nTPM: 751.2
Samples: 4

Max nTPM: 863.5
Min nTPM: 611.8
Sample A Female 611.8
Sample B Female 845.6
Sample C Male 863.5
Sample D Male 683.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 595.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 595.9
Samples: 4

Max nTPM: 666.4
Min nTPM: 552.5
Sample A Male 666.4
Sample B Male 552.5
Sample C Female 560.1
Sample D Female 604.5
Hippocampal formation
nTPM: 444.2
Samples: 4

Max nTPM: 492.2
Min nTPM: 408.4
Sample A Male 492.2
Sample B Male 457.0
Sample C Female 408.4
Sample D Female 419.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.8
73521823 Antisense, RP_051101_03_B07, Mouse strain C57BL/6J (56 days, male) 18.3
69873839 Antisense, RP_050512_02_B03, Mouse strain C57BL/6J (56 days, male) 13.3

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