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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
58.2
nTPM
GTEx:
58.2
nTPM
FANTOM5:
21.3
Scaled Tags Per Million
Pig:
98.7
nTPM
Mouse:
100.6
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
58.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 58.2
Samples: 105
Max nTPM: 107.3
Min nTPM: 27.5
Std nTPM: 16.4
Median nTPM:
415_1
77 years, female
107.3
35_1
74 years, female
104.3
162_1
79 years, female
101.3
266_1
85 years, male
98.3
149_1
88 years, male
94.9
142_1
61 years, female
90.9
43_1
64 years, female
88.3
466_1
57 years, female
83.1
99_1
64 years, male
80.2
518_1
75 years, female
78.6
315_1
62 years, female
78.5
145_1
84 years, male
78.3
286_1
68 years, female
77.0
32_1
67 years, male
76.7
115_1
83 years, male
74.8
117_1
61 years, male
73.5
6_1
73 years, female
73.3
491_1
89 years, female
73.2
153_1
70 years, female
71.2
265_1
87 years, male
71.2
9_1
66 years, female
70.6
81_1
67 years, male
69.8
499_1
55 years, female
69.3
126_1
63 years, male
68.6
468_1
89 years, male
67.9
109_1
81 years, female
67.4
490_1
67 years, female
67.0
42_1
85 years, male
66.8
237_1
82 years, male
66.3
414_1
84 years, female
66.1
217_1
76 years, male
65.9
501_1
88 years, male
65.3
288_1
66 years, female
65.0
375_1
74 years, female
64.5
316_1
62 years, male
62.9
324_1
76 years, male
62.4
137_1
83 years, male
61.8
18_1
88 years, male
61.5
413_1
59 years, female
61.4
119_1
70 years, female
61.3
139_1
64 years, female
60.5
313_1
79 years, female
60.3
229_1
69 years, female
60.2
4_1
88 years, female
59.6
172_1
72 years, female
59.3
350_1
84 years, female
59.2
354_1
81 years, female
58.4
396_1
62 years, male
58.4
379_1
60 years, male
58.1
335_1
73 years, female
57.6
120_1
70 years, female
57.4
246_1
77 years, male
57.4
405_1
91 years, male
57.3
17_1
71 years, male
57.2
386_1
76 years, male
56.9
89_1
63 years, male
56.8
376_1
75 years, female
56.7
311_1
78 years, male
56.6
526_1
61 years, male
56.1
318_1
68 years, male
56.0
243_1
75 years, male
55.6
322_1
76 years, male
54.1
353_1
82 years, female
52.8
320_1
89 years, female
52.4
355_1
70 years, female
51.5
356_1
87 years, female
51.5
503_1
68 years, male
51.5
377_1
82 years, female
51.2
251_1
78 years, male
50.9
2_1
77 years, female
50.6
447_1
81 years, male
50.3
314_1
67 years, male
49.9
292_1
71 years, male
49.5
349_1
83 years, male
47.8
394_1
75 years, female
46.0
307_1
66 years, female
45.7
254_1
77 years, female
45.3
264_1
73 years, female
45.2
480_1
63 years, male
44.8
189_1
76 years, male
44.6
293_1
68 years, female
44.2
389_1
86 years, female
44.1
506_1
65 years, male
44.0
177_1
74 years, male
43.5
495_1
57 years, female
43.2
384_1
83 years, male
42.7
517_1
88 years, male
42.6
317_1
60 years, male
42.4
351_1
91 years, male
42.3
308_1
70 years, female
41.7
347_1
72 years, male
40.9
348_1
84 years, male
40.9
404_1
82 years, female
40.6
352_1
62 years, male
39.9
425_1
59 years, female
39.3
291_1
76 years, male
38.8
319_1
81 years, male
38.8
173_1
67 years, male
38.7
406_1
79 years, male
35.7
41_1
94 years, female
35.1
218_1
71 years, female
34.9
163_1
78 years, male
34.6
295_1
61 years, female
32.5
321_1
62 years, female
29.2
452_1
88 years, female
27.5
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
The Human Protein Atlas project is funded
