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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
419.1
nTPM
FANTOM5:
568.5
Scaled Tags Per Million
Pig:
305.1
nTPM
Allen mouse:
6.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
419.1
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 210.2
1984
Male, age 76, both hemispheres
367.3
2090
Male, age 80, both hemispheres
204.1
2301
Female, age 85, both hemispheres
154.3
2188
Female, age 91, both hemispheres
115.0
Dorsal cochlear nucleus nTPM: 392.1
2058
Male, age 76, both hemispheres
519.8
2370
Male, age 61, both hemispheres
502.9
2802
Male, age 74, right hemisphere
467.4
2378
Male, age 80, both hemispheres
284.6
2187
Female, age 91, both hemispheres
185.8
Dorsal tegmental nucleus nTPM: 316.9
1936
Male, age 76, left hemisphere
418.1
2083
Male, age 80, both hemispheres
358.6
2326
Male, age 74, both hemispheres
284.7
2358
Male, age 61, both hemispheres
206.1
Dorsolateral tegmental area nTPM: 260.5
2654
Male, age 80, both hemispheres
338.9
2141
Male, age 76, both hemispheres
315.5
2751
Female, age 85, both hemispheres
305.4
2360
Male, age 74, both hemispheres
220.6
2337
Male, age 61, both hemispheres
121.8
Kolliker-Fuse nucleus nTPM: 219.6
2163
Male, age 80, both hemispheres
318.3
2315
Male, age 76, right hemisphere
235.7
2793
Female, age 91, left hemisphere
104.8
Lateral lemniscal nuclei nTPM: 242.4
2169
Male, age 76, both hemispheres
391.0
2453
Male, age 74, right hemisphere
301.6
2036
Male, age 80, both hemispheres
238.0
2320
Female, age 91, left hemisphere
151.5
2746
Female, age 85, left hemisphere
129.7
Lateral parabrachial nucleus nTPM: 203.3
2139
Female, age 85, right hemisphere
236.7
2013
Male, age 80, both hemispheres
201.0
2790
Male, age 61, both hemispheres
188.6
2792
Male, age 76, both hemispheres
186.8
Lateral vestibular nucleus nTPM: 353.6
2184
Male, age 76, both hemispheres
426.0
2311
Male, age 80, both hemispheres
281.2
Locus coeruleus nTPM: 320.8
2788
Male, age 74, unknown
436.5
1980
Male, age 76, both hemispheres
371.6
2317
Female, age 72, unknown
341.4
2123
Female, age 91, both hemispheres
309.4
2014
Male, age 55, unknown
299.5
2162
Male, age 80, both hemispheres
261.9
2720
Male, age 74, both hemispheres
225.4
Medial parabrachial nucleus nTPM: 258.4
2786
Male, age 76, both hemispheres
351.1
2156
Male, age 61, both hemispheres
292.4
2463
Female, age 85, right hemisphere
263.4
2854
Male, age 80, both hemispheres
206.5
2170
Female, age 91, both hemispheres
178.8
Medial periolivary nuclei nTPM: 226.9
2063
Male, age 76, both hemispheres
388.8
2171
Female, age 85, both hemispheres
226.0
2791
Male, age 74, right hemisphere
205.8
2458
Female, age 91, both hemispheres
174.5
2081
Male, age 80, both hemispheres
139.3
Motor facial nucleus nTPM: 300.0
2795
Female, age 91, both hemispheres
649.5
2062
Male, age 76, both hemispheres
465.1
2126
Male, age 61, both hemispheres
228.3
2365
Male, age 74, right hemisphere
175.8
2327
Male, age 80, both hemispheres
173.2
2697
Female, age 85, both hemispheres
107.9
Motor trigeminal nucleus nTPM: 223.1
2309
Male, age 76, both hemispheres
329.4
2335
Male, age 61, both hemispheres
276.2
2560
Male, age 74, both hemispheres
188.8
2079
Male, age 80, both hemispheres
178.5
2321
Female, age 91, both hemispheres
142.8
Nuclei of the trapezoid body nTPM: 302.5
1983
Male, age 76, both hemispheres
408.5
2368
Female, age 91, both hemispheres
403.5
2735
Female, age 85, both hemispheres
243.5
2159
Male, age 61, both hemispheres
235.6
2166
Male, age 80, both hemispheres
221.8
Nucleus raphe magnus nTPM: 232.5
2051
Male, age 76, both hemispheres
295.9
2455
Male, age 74, both hemispheres
282.8
2328
Male, age 80, both hemispheres
247.6
2160
Male, age 61, both hemispheres
231.8
2459
Female, age 91, both hemispheres
201.2
2172
Female, age 85, both hemispheres
135.9
Paramedian reticular nucleus nTPM: 329.5
2057
Male, age 80, both hemispheres
378.0
2313
Male, age 61, both hemispheres
370.7
2052
Male, age 76, both hemispheres
341.5
2050
Female, age 85, both hemispheres
227.9
Pedunculopontine tegmental nucleus nTPM: 312.6
1921
Female, age 85, both hemispheres
447.3
2334
Male, age 80, both hemispheres
321.9
2338
Male, age 61, both hemispheres
168.5
Pontine nuclei nTPM: 209.4
1863
Male, age 55, unknown
345.3
1968
Male, age 76, left hemisphere
327.9
2109
Female, age 72, unknown
217.6
2727
Male, age 61, right hemisphere
181.3
2454
Male, age 74, left hemisphere
167.9
2115
Male, age 80, left hemisphere
153.9
2787
Female, age 85, both hemispheres
150.2
2319
Female, age 91, both hemispheres
131.1
Pontine raphe nucleus nTPM: 308.2
2853
Male, age 76, midline
401.4
2122
Female, age 85, midline
215.1
Posteroventral cochlear nucleus nTPM: 286.3
2371
Male, age 61, both hemispheres
515.6
2070
Male, age 76, both hemispheres
340.8
2752
Female, age 85, both hemispheres
334.4
2341
Male, age 80, both hemispheres
182.0
2135
Female, age 91, both hemispheres
58.5
Principal sensory trigeminal nucleus nTPM: 252.9
2324
Male, age 76, both hemispheres
481.5
2158
Male, age 61, both hemispheres
217.4
2008
Male, age 80, left hemisphere
199.2
2367
Female, age 91, left hemisphere
113.7
Reticular pontine nucleus, caudal nTPM: 233.1
2092
Male, age 76, both hemispheres
317.3
2457
Female, age 91, both hemispheres
240.4
2332
Male, age 80, right hemisphere
223.1
2559
Male, age 74, both hemispheres
151.6
Reticular pontine nucleus, oral nTPM: 247.8
1939
Male, age 80, both hemispheres
363.7
2167
Male, age 76, both hemispheres
350.9
2012
Female, age 85, both hemispheres
246.1
2366
Female, age 91, both hemispheres
147.0
2361
Male, age 74, both hemispheres
131.4
Reticulotegmental nucleus nTPM: 337.5
2322
Female, age 91, both hemispheres
383.0
2333
Male, age 80, both hemispheres
369.6
2325
Male, age 76, both hemispheres
344.8
2452
Male, age 74, both hemispheres
252.7
Spinal trigeminal nucleus, oral nTPM: 419.1
1978
Male, age 76, both hemispheres
690.3
2737
Female, age 85, both hemispheres
306.3
2164
Male, age 80, both hemispheres
260.6
Subcoeruleus area nTPM: 324.9
2323
Female, age 91, left hemisphere
389.6
2451
Male, age 74, both hemispheres
328.5
2089
Male, age 76, left hemisphere
309.0
2369
Female, age 85, left hemisphere
304.0
1958
Male, age 80, both hemispheres
293.5
Superior olive nTPM: 205.2
2020
Male, age 76, both hemispheres
251.7
2561
Female, age 91, both hemispheres
224.6
2329
Male, age 80, right hemisphere
219.6
1875
Female, age 85, both hemispheres
171.7
2364
Male, age 74, right hemisphere
158.1
Ventral periolivary nuclei nTPM: 212.0
2165
Male, age 80, both hemispheres
311.5
2130
Female, age 85, both hemispheres
220.8
2023
Male, age 76, both hemispheres
187.3
2794
Female, age 91, left hemisphere
128.4
Ventrolateral tegmental area, A5 NE cell group nTPM: 250.4
2456
Female, age 91, both hemispheres
316.7
1959
Male, age 76, both hemispheres
281.6
2359
Male, age 61, both hemispheres
245.9
2161
Male, age 80, both hemispheres
224.4
2449
Male, age 74, both hemispheres
221.1
2840
Female, age 85, both hemispheres
212.8
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
305.1
Pig sample
Sample description
nTPM
Pons nTPM: 305.1
Samples: 4
Max nTPM: 369.7
Min nTPM: 251.7
Sample A
Female
342.6
Sample B
Female
256.2
Sample C
Male
251.7
Sample D
Male
369.7
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
