HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Not detected
RNA expressioni
Consensus:22.7 nTPM
HPA Brain:30.4 nTPM
GTEx:22.7 nTPM
FANTOM5:34.1 Scaled Tags Per Million
Pig:17.0 nTPM
Mouse:30.3 nTPM
Allen mouse:5.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB034258
Glial cells Medium
Neuronal cells Not detected


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 30.4
Sample id Sample description nTPM
Hippocampus
nTPM: 27.9
1855 Male, age 76, left hemisphere 29.4
2529 Female, age 94, left hemisphere 28.5
1898 Male, age 80, left hemisphere 28.4
1911 Female, age 85, right hemisphere 28.0
2148 Female, age 91, left hemisphere 27.4
2621 Female, age 67, right hemisphere 25.7
Dentate gyrus
nTPM: 28.1
2528 Male, age 74, both hemispheres 30.5
2010 Male, age 76, both hemispheres 29.4
2246 Female, age 85, both hemispheres 27.8
2531 Female, age 67, both hemispheres 27.6
1927 Female, age 91, both hemispheres 27.3
2530 Female, age 94, left hemisphere 26.0
Entorhinal gyrus
nTPM: 27.8
2613 Female, age 94, left hemisphere 29.5
2117 Female, age 91, right hemisphere 27.8
1787 Male, age 76, left hemisphere 27.7
2764 Male, age 80, right hemisphere 27.6
1938 Female, age 85, left hemisphere 27.4
2686 Male, age 75, right hemisphere 26.6
Hippocampus, CA1
nTPM: 28.8
1873 Female, age 85, both hemispheres 30.3
2045 Male, age 76, both hemispheres 30.3
2082 Female, age 91, right hemisphere 29.2
2749 Male, age 80, left hemisphere 28.2
2527 Male, age 74, both hemispheres 25.8
Hippocampus, CA2
nTPM: 28.7
1963 Male, age 80, left hemisphere 30.7
1940 Female, age 85, left hemisphere 30.4
2113 Female, age 91, right hemisphere 28.8
2249 Male, age 74, both hemispheres 28.7
2437 Female, age 94, left hemisphere 27.2
1892 Male, age 76, both hemispheres 26.5
Hippocampus, CA3
nTPM: 27.6
1891 Female, age 85, both hemispheres 30.5
2620 Female, age 94, left hemisphere 29.6
2137 Male, age 80, left hemisphere 27.4
2436 Male, age 74, both hemispheres 27.3
1867 Male, age 76, both hemispheres 26.9
2861 Female, age 67, both hemispheres 23.9
Parahippocampal cortex
nTPM: 28.3
2532 Female, age 72, left hemisphere 30.6
2250 Female, age 67, right hemisphere 29.2
2693 Female, age 94, both hemispheres 29.1
1933 Female, age 85, both hemispheres 28.9
1850 Male, age 80, both hemispheres 28.8
1990 Female, age 91, right hemisphere 28.2
2692 Male, age 74, both hemispheres 27.9
2018 Male, age 76, both hemispheres 27.7
2245 Female, age 91, both hemispheres 26.3
2622 Female, age 67, right hemisphere 26.3
Perirhinal gyrus
nTPM: 28.1
1841 Female, age 85, right hemisphere 30.0
2848 Male, age 76, right hemisphere 29.1
1847 Female, age 91, left hemisphere 28.5
1794 Male, age 80, right hemisphere 26.6
2521 Female, age 94, right hemisphere 26.3
Subiculum
nTPM: 30.4
2042 Male, age 76, both hemispheres 33.3
2438 Female, age 94, left hemisphere 33.3
2729 Female, age 91, right hemisphere 32.0
1901 Male, age 80, both hemispheres 29.3
1977 Female, age 85, both hemispheres 29.1
2619 Male, age 74, both hemispheres 25.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.7
Samples: 197

Max nTPM: 39.9
Min nTPM: 14.8
Std nTPM: 3.1
Median nTPM: 22.5
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 39.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 31.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 29.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 29.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 29.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 29.2
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 29.0
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 28.6
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 28.3
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 28.2
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 28.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 34.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 34.1
FF:10169-103B7 60 years, female 35.3
FF:10153-102I9 76 years, female 32.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.0
Pig sample Sample description nTPM
Subiculum
nTPM: 14.1
Samples: 4

Max nTPM: 15.5
Min nTPM: 12.9
Sample A Female 15.5
Sample B Female 12.9
Sample C Male 14.2
Sample D Male 13.7
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 18.9
Min nTPM: 14.4
Sample A Female 18.2
Sample B Female 16.4
Sample C Male 18.9
Sample D Male 14.4
Entorhinal cortex
nTPM: 13.6
Samples: 4

Max nTPM: 15.6
Min nTPM: 11.9
Sample A Female 11.9
Sample B Female 14.7
Sample C Male 15.6
Sample D Male 12.3
Ventral hippocampus
nTPM: 15.6
Samples: 4

Max nTPM: 19.0
Min nTPM: 11.5
Sample A Female 14.5
Sample B Female 11.5
Sample C Male 19.0
Sample D Male 17.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 30.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 30.3
Samples: 4

Max nTPM: 32.9
Min nTPM: 27.5
Sample A Male 28.1
Sample B Male 32.6
Sample C Female 32.9
Sample D Female 27.5
Hippocampal formation
nTPM: 29.5
Samples: 4

Max nTPM: 34.9
Min nTPM: 25.7
Sample A Male 34.9
Sample B Male 29.5
Sample C Female 25.7
Sample D Female 27.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.6
72727 Antisense, RP_040407_01_A09, Mouse strain C57BL/6J (56 days, male) 5.6

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