HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:1129.7 nTPM
HPA Brain:554.7 nTPM
GTEx:1129.7 nTPM
FANTOM5:457.7 Scaled Tags Per Million
Pig:85.7 nTPM
Mouse:715.2 nTPM
Allen mouse:6.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA062394
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 554.7
Sample id Sample description nTPM
Hippocampus
nTPM: 507.5
1898 Male, age 80, left hemisphere 669.5
2529 Female, age 94, left hemisphere 642.2
2621 Female, age 67, right hemisphere 526.3
1855 Male, age 76, left hemisphere 429.5
1911 Female, age 85, right hemisphere 413.4
2148 Female, age 91, left hemisphere 363.8
Dentate gyrus
nTPM: 447.1
2010 Male, age 76, both hemispheres 499.4
2530 Female, age 94, left hemisphere 476.2
2246 Female, age 85, both hemispheres 475.4
1927 Female, age 91, both hemispheres 454.4
2528 Male, age 74, both hemispheres 389.8
2531 Female, age 67, both hemispheres 387.7
Entorhinal gyrus
nTPM: 428.1
2764 Male, age 80, right hemisphere 528.5
1787 Male, age 76, left hemisphere 491.3
1938 Female, age 85, left hemisphere 447.5
2613 Female, age 94, left hemisphere 406.4
2117 Female, age 91, right hemisphere 391.4
2686 Male, age 75, right hemisphere 303.5
Hippocampus, CA1
nTPM: 541.0
2749 Male, age 80, left hemisphere 910.4
2527 Male, age 74, both hemispheres 547.4
1873 Female, age 85, both hemispheres 455.5
2082 Female, age 91, right hemisphere 424.4
2045 Male, age 76, both hemispheres 367.3
Hippocampus, CA2
nTPM: 515.1
1963 Male, age 80, left hemisphere 668.4
1892 Male, age 76, both hemispheres 571.9
2437 Female, age 94, left hemisphere 556.6
2249 Male, age 74, both hemispheres 547.3
2113 Female, age 91, right hemisphere 399.0
1940 Female, age 85, left hemisphere 347.3
Hippocampus, CA3
nTPM: 479.3
2137 Male, age 80, left hemisphere 655.9
1867 Male, age 76, both hemispheres 546.2
2436 Male, age 74, both hemispheres 522.5
1891 Female, age 85, both hemispheres 440.5
2620 Female, age 94, left hemisphere 357.4
2861 Female, age 67, both hemispheres 353.3
Parahippocampal cortex
nTPM: 474.6
2250 Female, age 67, right hemisphere 696.0
2245 Female, age 91, both hemispheres 558.4
1850 Male, age 80, both hemispheres 513.4
1990 Female, age 91, right hemisphere 505.7
1933 Female, age 85, both hemispheres 499.3
2018 Male, age 76, both hemispheres 450.0
2532 Female, age 72, left hemisphere 431.2
2693 Female, age 94, both hemispheres 382.7
2692 Male, age 74, both hemispheres 358.1
2622 Female, age 67, right hemisphere 351.0
Perirhinal gyrus
nTPM: 554.7
1847 Female, age 91, left hemisphere 739.5
1794 Male, age 80, right hemisphere 592.5
2521 Female, age 94, right hemisphere 555.2
1841 Female, age 85, right hemisphere 504.7
2848 Male, age 76, right hemisphere 381.7
Subiculum
nTPM: 498.4
2438 Female, age 94, left hemisphere 653.3
1977 Female, age 85, both hemispheres 532.2
1901 Male, age 80, both hemispheres 531.5
2619 Male, age 74, both hemispheres 522.7
2042 Male, age 76, both hemispheres 392.2
2729 Female, age 91, right hemisphere 358.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1129.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1129.7
Samples: 197

Max nTPM: 2718.5
Min nTPM: 386.3
Std nTPM: 432.7
Median nTPM: 1039.7
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2718.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 2548.1
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 2533.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2532.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2407.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 2394.5
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 2308.1
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2254.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 2244.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2130.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2115.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 457.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 457.7
FF:10153-102I9 76 years, female 493.8
FF:10169-103B7 60 years, female 421.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 85.7
Pig sample Sample description nTPM
Subiculum
nTPM: 68.8
Samples: 4

Max nTPM: 93.6
Min nTPM: 59.2
Sample A Female 93.6
Sample B Female 61.6
Sample C Male 59.2
Sample D Male 60.8
Dorsal hippocampus
nTPM: 85.7
Samples: 4

Max nTPM: 113.9
Min nTPM: 58.7
Sample A Female 113.9
Sample B Female 73.4
Sample C Male 96.7
Sample D Male 58.7
Entorhinal cortex
nTPM: 75.1
Samples: 4

Max nTPM: 90.6
Min nTPM: 58.0
Sample A Female 72.5
Sample B Female 90.6
Sample C Male 79.1
Sample D Male 58.0
Ventral hippocampus
nTPM: 79.8
Samples: 4

Max nTPM: 91.2
Min nTPM: 56.8
Sample A Female 90.5
Sample B Female 56.8
Sample C Male 91.2
Sample D Male 80.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 715.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 683.0
Samples: 4

Max nTPM: 724.5
Min nTPM: 630.4
Sample A Male 688.4
Sample B Male 724.5
Sample C Female 688.6
Sample D Female 630.4
Hippocampal formation
nTPM: 715.3
Samples: 4

Max nTPM: 778.3
Min nTPM: 647.4
Sample A Male 778.3
Sample B Male 662.7
Sample C Female 647.4
Sample D Female 772.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.1
69080022 Antisense, RP_050324_01_D12, Mouse strain C57BL/6J (56 days, male) 6.1

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