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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
662.4
nTPM
FANTOM5:
631.1
Scaled Tags Per Million
Pig:
139.0
nTPM
Allen mouse:
6.1
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
662.4
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 475.9
2301
Female, age 85, both hemispheres
568.9
2090
Male, age 80, both hemispheres
464.6
1984
Male, age 76, both hemispheres
442.0
2188
Female, age 91, both hemispheres
428.1
Dorsal cochlear nucleus nTPM: 557.8
2187
Female, age 91, both hemispheres
700.5
2802
Male, age 74, right hemisphere
684.2
2058
Male, age 76, both hemispheres
497.6
2370
Male, age 61, both hemispheres
491.7
2378
Male, age 80, both hemispheres
415.1
Dorsal tegmental nucleus nTPM: 559.5
2326
Male, age 74, both hemispheres
641.2
2083
Male, age 80, both hemispheres
610.5
2358
Male, age 61, both hemispheres
509.8
1936
Male, age 76, left hemisphere
476.4
Dorsolateral tegmental area nTPM: 578.6
2751
Female, age 85, both hemispheres
773.4
2654
Male, age 80, both hemispheres
637.4
2337
Male, age 61, both hemispheres
543.4
2360
Male, age 74, both hemispheres
484.2
2141
Male, age 76, both hemispheres
454.5
Kolliker-Fuse nucleus nTPM: 512.1
2163
Male, age 80, both hemispheres
630.1
2315
Male, age 76, right hemisphere
456.4
2793
Female, age 91, left hemisphere
449.9
Lateral lemniscal nuclei nTPM: 467.1
2169
Male, age 76, both hemispheres
617.9
2036
Male, age 80, both hemispheres
506.5
2746
Female, age 85, left hemisphere
440.5
2453
Male, age 74, right hemisphere
389.1
2320
Female, age 91, left hemisphere
381.6
Lateral parabrachial nucleus nTPM: 505.4
2139
Female, age 85, right hemisphere
568.7
2013
Male, age 80, both hemispheres
553.3
2790
Male, age 61, both hemispheres
457.8
2792
Male, age 76, both hemispheres
441.7
Lateral vestibular nucleus nTPM: 502.7
2184
Male, age 76, both hemispheres
531.7
2311
Male, age 80, both hemispheres
473.7
Locus coeruleus nTPM: 507.9
2123
Female, age 91, both hemispheres
628.5
2720
Male, age 74, both hemispheres
608.9
2014
Male, age 55, unknown
550.0
1980
Male, age 76, both hemispheres
474.3
2162
Male, age 80, both hemispheres
454.4
2317
Female, age 72, unknown
426.9
2788
Male, age 74, unknown
412.5
Medial parabrachial nucleus nTPM: 662.4
2170
Female, age 91, both hemispheres
1051.1
2463
Female, age 85, right hemisphere
641.1
2854
Male, age 80, both hemispheres
605.8
2156
Male, age 61, both hemispheres
535.2
2786
Male, age 76, both hemispheres
478.9
Medial periolivary nuclei nTPM: 470.4
2063
Male, age 76, both hemispheres
642.8
2171
Female, age 85, both hemispheres
570.8
2791
Male, age 74, right hemisphere
400.2
2458
Female, age 91, both hemispheres
384.6
2081
Male, age 80, both hemispheres
353.5
Motor facial nucleus nTPM: 483.2
2062
Male, age 76, both hemispheres
716.2
2126
Male, age 61, both hemispheres
539.3
2697
Female, age 85, both hemispheres
450.3
2365
Male, age 74, right hemisphere
436.8
2795
Female, age 91, both hemispheres
402.4
2327
Male, age 80, both hemispheres
354.0
Motor trigeminal nucleus nTPM: 504.8
2335
Male, age 61, both hemispheres
546.8
2321
Female, age 91, both hemispheres
529.8
2309
Male, age 76, both hemispheres
520.6
2560
Male, age 74, both hemispheres
483.6
2079
Male, age 80, both hemispheres
443.1
Nuclei of the trapezoid body nTPM: 548.8
1983
Male, age 76, both hemispheres
732.5
2159
Male, age 61, both hemispheres
670.7
2735
Female, age 85, both hemispheres
538.1
2166
Male, age 80, both hemispheres
429.7
2368
Female, age 91, both hemispheres
373.0
Nucleus raphe magnus nTPM: 501.7
2160
Male, age 61, both hemispheres
635.2
2172
Female, age 85, both hemispheres
577.4
2051
Male, age 76, both hemispheres
517.2
2455
Male, age 74, both hemispheres
476.1
2328
Male, age 80, both hemispheres
435.0
2459
Female, age 91, both hemispheres
368.9
Paramedian reticular nucleus nTPM: 578.5
2050
Female, age 85, both hemispheres
667.4
2057
Male, age 80, both hemispheres
631.9
2313
Male, age 61, both hemispheres
584.3
2052
Male, age 76, both hemispheres
430.3
Pedunculopontine tegmental nucleus nTPM: 545.2
2334
Male, age 80, both hemispheres
571.7
2338
Male, age 61, both hemispheres
571.5
1921
Female, age 85, both hemispheres
492.3
Pontine nuclei nTPM: 580.5
1863
Male, age 55, unknown
721.6
1968
Male, age 76, left hemisphere
635.5
2454
Male, age 74, left hemisphere
621.8
2727
Male, age 61, right hemisphere
604.7
2787
Female, age 85, both hemispheres
600.7
2109
Female, age 72, unknown
600.1
2319
Female, age 91, both hemispheres
466.4
2115
Male, age 80, left hemisphere
393.5
Pontine raphe nucleus nTPM: 542.3
2122
Female, age 85, midline
597.2
2853
Male, age 76, midline
487.4
Posteroventral cochlear nucleus nTPM: 499.5
2752
Female, age 85, both hemispheres
633.6
2341
Male, age 80, both hemispheres
505.8
2371
Male, age 61, both hemispheres
479.6
2070
Male, age 76, both hemispheres
472.5
2135
Female, age 91, both hemispheres
406.1
Principal sensory trigeminal nucleus nTPM: 516.6
2158
Male, age 61, both hemispheres
635.9
2324
Male, age 76, both hemispheres
523.7
2008
Male, age 80, left hemisphere
471.7
2367
Female, age 91, left hemisphere
434.9
Reticular pontine nucleus, caudal nTPM: 524.3
2559
Male, age 74, both hemispheres
816.5
2092
Male, age 76, both hemispheres
559.3
2332
Male, age 80, right hemisphere
390.2
2457
Female, age 91, both hemispheres
331.1
Reticular pontine nucleus, oral nTPM: 599.9
2361
Male, age 74, both hemispheres
742.8
1939
Male, age 80, both hemispheres
662.5
2012
Female, age 85, both hemispheres
583.5
2167
Male, age 76, both hemispheres
557.7
2366
Female, age 91, both hemispheres
452.9
Reticulotegmental nucleus nTPM: 588.1
2452
Male, age 74, both hemispheres
751.4
2322
Female, age 91, both hemispheres
577.1
2325
Male, age 76, both hemispheres
544.1
2333
Male, age 80, both hemispheres
479.9
Spinal trigeminal nucleus, oral nTPM: 491.5
2737
Female, age 85, both hemispheres
540.2
2164
Male, age 80, both hemispheres
512.3
1978
Male, age 76, both hemispheres
422.1
Subcoeruleus area nTPM: 576.5
2369
Female, age 85, left hemisphere
696.5
2451
Male, age 74, both hemispheres
594.5
1958
Male, age 80, both hemispheres
578.2
2323
Female, age 91, left hemisphere
550.3
2089
Male, age 76, left hemisphere
463.3
Superior olive nTPM: 456.2
2020
Male, age 76, both hemispheres
522.3
1875
Female, age 85, both hemispheres
514.3
2364
Male, age 74, right hemisphere
437.7
2329
Male, age 80, right hemisphere
410.1
2561
Female, age 91, both hemispheres
396.6
Ventral periolivary nuclei nTPM: 481.8
2130
Female, age 85, both hemispheres
521.7
2023
Male, age 76, both hemispheres
517.4
2165
Male, age 80, both hemispheres
512.3
2794
Female, age 91, left hemisphere
375.8
Ventrolateral tegmental area, A5 NE cell group nTPM: 440.9
2840
Female, age 85, both hemispheres
532.6
1959
Male, age 76, both hemispheres
482.2
2359
Male, age 61, both hemispheres
461.2
2161
Male, age 80, both hemispheres
405.6
2449
Male, age 74, both hemispheres
398.2
2456
Female, age 91, both hemispheres
365.7
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
139.0
Pig sample
Sample description
nTPM
Pons nTPM: 139.0
Samples: 4
Max nTPM: 172.1
Min nTPM: 97.6
Sample A
Female
144.2
Sample B
Female
97.6
Sample C
Male
142.2
Sample D
Male
172.1
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
