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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
380.2
nTPM
GTEx:
380.2
nTPM
FANTOM5:
204.9
Scaled Tags Per Million
Pig:
44.4
nTPM
Mouse:
340.3
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
380.2
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 380.2
Samples: 105
Max nTPM: 571.9
Min nTPM: 169.4
Std nTPM: 72.3
Median nTPM: 0.0
319_1
81 years, male
571.9
377_1
82 years, female
548.9
352_1
62 years, male
529.4
322_1
76 years, male
508.6
356_1
87 years, female
491.3
35_1
74 years, female
490.0
375_1
74 years, female
483.1
163_1
78 years, male
482.9
386_1
76 years, male
478.5
320_1
89 years, female
478.4
425_1
59 years, female
475.3
218_1
71 years, female
474.0
354_1
81 years, female
470.8
321_1
62 years, female
469.3
350_1
84 years, female
465.5
177_1
74 years, male
451.9
406_1
79 years, male
451.7
115_1
83 years, male
446.6
379_1
60 years, male
446.3
351_1
91 years, male
445.3
243_1
75 years, male
440.2
316_1
62 years, male
439.8
506_1
65 years, male
430.7
153_1
70 years, female
425.1
353_1
82 years, female
424.6
6_1
73 years, female
420.3
376_1
75 years, female
419.6
405_1
91 years, male
416.3
246_1
77 years, male
416.0
335_1
73 years, female
415.9
480_1
63 years, male
415.9
237_1
82 years, male
413.1
2_1
77 years, female
411.5
355_1
70 years, female
408.7
447_1
81 years, male
408.5
518_1
75 years, female
407.5
172_1
72 years, female
404.9
4_1
88 years, female
403.5
384_1
83 years, male
402.5
347_1
72 years, male
402.4
229_1
69 years, female
401.8
394_1
75 years, female
398.1
126_1
63 years, male
397.3
142_1
61 years, female
395.6
389_1
86 years, female
393.0
189_1
76 years, male
392.5
404_1
82 years, female
391.7
17_1
71 years, male
390.7
526_1
61 years, male
389.3
452_1
88 years, female
388.6
286_1
68 years, female
386.8
99_1
64 years, male
385.4
349_1
83 years, male
385.3
18_1
88 years, male
383.3
251_1
78 years, male
383.0
293_1
68 years, female
376.4
318_1
68 years, male
374.9
292_1
71 years, male
371.2
120_1
70 years, female
369.3
468_1
89 years, male
368.1
265_1
87 years, male
367.1
254_1
77 years, female
365.0
109_1
81 years, female
364.7
266_1
85 years, male
363.4
396_1
62 years, male
362.6
308_1
70 years, female
361.7
466_1
57 years, female
357.6
9_1
66 years, female
357.1
414_1
84 years, female
356.0
503_1
68 years, male
356.0
162_1
79 years, female
354.1
324_1
76 years, male
353.6
119_1
70 years, female
352.6
145_1
84 years, male
351.8
173_1
67 years, male
351.4
264_1
73 years, female
351.0
313_1
79 years, female
348.1
117_1
61 years, male
346.3
499_1
55 years, female
343.2
139_1
64 years, female
340.2
517_1
88 years, male
334.9
415_1
77 years, female
334.7
315_1
62 years, female
331.0
317_1
60 years, male
323.9
295_1
61 years, female
322.6
81_1
67 years, male
321.7
348_1
84 years, male
310.9
137_1
83 years, male
305.1
42_1
85 years, male
302.8
307_1
66 years, female
302.3
501_1
88 years, male
297.6
495_1
57 years, female
293.8
291_1
76 years, male
292.0
41_1
94 years, female
290.4
288_1
66 years, female
289.2
217_1
76 years, male
288.4
89_1
63 years, male
281.0
311_1
78 years, male
274.7
43_1
64 years, female
273.8
32_1
67 years, male
268.0
413_1
59 years, female
238.1
149_1
88 years, male
236.8
490_1
67 years, female
214.4
314_1
67 years, male
212.4
491_1
89 years, female
169.4
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.