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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
436.9
nTPM
FANTOM5:
1140.5
Scaled Tags Per Million
Pig:
388.7
nTPM
Allen mouse:
19.6
Expression energy
PONS - HPA Brain RNA-seq
Max nTPM
436.9
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 321.4
2188
Female, age 91, both hemispheres
397.2
2301
Female, age 85, both hemispheres
330.5
2090
Male, age 80, both hemispheres
306.3
1984
Male, age 76, both hemispheres
251.7
Dorsal cochlear nucleus nTPM: 333.2
2802
Male, age 74, right hemisphere
446.2
2187
Female, age 91, both hemispheres
391.2
2378
Male, age 80, both hemispheres
304.0
2058
Male, age 76, both hemispheres
285.1
2370
Male, age 61, both hemispheres
239.7
Dorsal tegmental nucleus nTPM: 297.0
2326
Male, age 74, both hemispheres
405.2
2083
Male, age 80, both hemispheres
311.5
1936
Male, age 76, left hemisphere
283.8
2358
Male, age 61, both hemispheres
187.6
Dorsolateral tegmental area nTPM: 300.0
2751
Female, age 85, both hemispheres
385.8
2654
Male, age 80, both hemispheres
332.9
2360
Male, age 74, both hemispheres
330.7
2141
Male, age 76, both hemispheres
257.5
2337
Male, age 61, both hemispheres
193.3
Kolliker-Fuse nucleus nTPM: 324.6
2315
Male, age 76, right hemisphere
330.8
2793
Female, age 91, left hemisphere
325.2
2163
Male, age 80, both hemispheres
317.7
Lateral lemniscal nuclei nTPM: 360.0
2169
Male, age 76, both hemispheres
425.1
2036
Male, age 80, both hemispheres
407.1
2746
Female, age 85, left hemisphere
366.0
2453
Male, age 74, right hemisphere
310.1
2320
Female, age 91, left hemisphere
291.8
Lateral parabrachial nucleus nTPM: 326.2
2139
Female, age 85, right hemisphere
377.4
2013
Male, age 80, both hemispheres
346.5
2792
Male, age 76, both hemispheres
332.2
2790
Male, age 61, both hemispheres
248.6
Lateral vestibular nucleus nTPM: 292.8
2311
Male, age 80, both hemispheres
308.0
2184
Male, age 76, both hemispheres
277.7
Locus coeruleus nTPM: 333.2
2014
Male, age 55, unknown
404.2
2788
Male, age 74, unknown
380.3
2123
Female, age 91, both hemispheres
341.7
2720
Male, age 74, both hemispheres
341.6
2317
Female, age 72, unknown
312.0
2162
Male, age 80, both hemispheres
287.4
1980
Male, age 76, both hemispheres
265.6
Medial parabrachial nucleus nTPM: 325.7
2170
Female, age 91, both hemispheres
448.2
2854
Male, age 80, both hemispheres
373.3
2463
Female, age 85, right hemisphere
293.8
2786
Male, age 76, both hemispheres
276.4
2156
Male, age 61, both hemispheres
236.8
Medial periolivary nuclei nTPM: 389.3
2063
Male, age 76, both hemispheres
477.1
2791
Male, age 74, right hemisphere
436.7
2171
Female, age 85, both hemispheres
430.5
2081
Male, age 80, both hemispheres
317.6
2458
Female, age 91, both hemispheres
284.6
Motor facial nucleus nTPM: 353.9
2062
Male, age 76, both hemispheres
479.5
2365
Male, age 74, right hemisphere
383.5
2697
Female, age 85, both hemispheres
328.7
2795
Female, age 91, both hemispheres
320.6
2126
Male, age 61, both hemispheres
319.4
2327
Male, age 80, both hemispheres
291.9
Motor trigeminal nucleus nTPM: 292.3
2079
Male, age 80, both hemispheres
340.7
2560
Male, age 74, both hemispheres
303.8
2321
Female, age 91, both hemispheres
298.7
2309
Male, age 76, both hemispheres
290.4
2335
Male, age 61, both hemispheres
228.1
Nuclei of the trapezoid body nTPM: 403.5
2159
Male, age 61, both hemispheres
502.9
1983
Male, age 76, both hemispheres
459.6
2735
Female, age 85, both hemispheres
426.6
2166
Male, age 80, both hemispheres
325.7
2368
Female, age 91, both hemispheres
302.9
Nucleus raphe magnus nTPM: 385.2
2160
Male, age 61, both hemispheres
547.2
2172
Female, age 85, both hemispheres
389.2
2051
Male, age 76, both hemispheres
377.5
2455
Male, age 74, both hemispheres
371.3
2459
Female, age 91, both hemispheres
313.1
2328
Male, age 80, both hemispheres
312.6
Paramedian reticular nucleus nTPM: 378.0
2050
Female, age 85, both hemispheres
422.5
2052
Male, age 76, both hemispheres
379.3
2057
Male, age 80, both hemispheres
356.4
2313
Male, age 61, both hemispheres
353.8
Pedunculopontine tegmental nucleus nTPM: 305.2
1921
Female, age 85, both hemispheres
322.5
2334
Male, age 80, both hemispheres
318.5
2338
Male, age 61, both hemispheres
274.6
Pontine nuclei nTPM: 436.9
2727
Male, age 61, right hemisphere
568.5
1863
Male, age 55, unknown
536.8
2109
Female, age 72, unknown
467.3
2454
Male, age 74, left hemisphere
455.3
2787
Female, age 85, both hemispheres
413.6
1968
Male, age 76, left hemisphere
397.7
2319
Female, age 91, both hemispheres
376.8
2115
Male, age 80, left hemisphere
279.1
Pontine raphe nucleus nTPM: 362.5
2122
Female, age 85, midline
415.3
2853
Male, age 76, midline
309.7
Posteroventral cochlear nucleus nTPM: 333.1
2135
Female, age 91, both hemispheres
409.7
2341
Male, age 80, both hemispheres
360.6
2752
Female, age 85, both hemispheres
350.7
2070
Male, age 76, both hemispheres
289.0
2371
Male, age 61, both hemispheres
255.5
Principal sensory trigeminal nucleus nTPM: 355.4
2158
Male, age 61, both hemispheres
418.1
2008
Male, age 80, left hemisphere
409.3
2367
Female, age 91, left hemisphere
331.8
2324
Male, age 76, both hemispheres
262.2
Reticular pontine nucleus, caudal nTPM: 340.9
2559
Male, age 74, both hemispheres
378.4
2092
Male, age 76, both hemispheres
374.6
2457
Female, age 91, both hemispheres
330.9
2332
Male, age 80, right hemisphere
279.6
Reticular pontine nucleus, oral nTPM: 363.2
2361
Male, age 74, both hemispheres
440.0
2012
Female, age 85, both hemispheres
397.8
1939
Male, age 80, both hemispheres
347.4
2366
Female, age 91, both hemispheres
331.6
2167
Male, age 76, both hemispheres
299.1
Reticulotegmental nucleus nTPM: 321.6
2325
Male, age 76, both hemispheres
350.8
2322
Female, age 91, both hemispheres
330.7
2452
Male, age 74, both hemispheres
315.6
2333
Male, age 80, both hemispheres
289.2
Spinal trigeminal nucleus, oral nTPM: 285.8
2737
Female, age 85, both hemispheres
300.2
2164
Male, age 80, both hemispheres
281.1
1978
Male, age 76, both hemispheres
276.2
Subcoeruleus area nTPM: 344.9
2369
Female, age 85, left hemisphere
382.7
1958
Male, age 80, both hemispheres
381.9
2089
Male, age 76, left hemisphere
340.2
2451
Male, age 74, both hemispheres
321.7
2323
Female, age 91, left hemisphere
298.1
Superior olive nTPM: 374.1
1875
Female, age 85, both hemispheres
464.6
2364
Male, age 74, right hemisphere
421.5
2020
Male, age 76, both hemispheres
414.1
2329
Male, age 80, right hemisphere
299.0
2561
Female, age 91, both hemispheres
271.3
Ventral periolivary nuclei nTPM: 367.7
2023
Male, age 76, both hemispheres
431.7
2130
Female, age 85, both hemispheres
380.0
2165
Male, age 80, both hemispheres
375.3
2794
Female, age 91, left hemisphere
283.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 325.9
1959
Male, age 76, both hemispheres
380.2
2840
Female, age 85, both hemispheres
354.6
2449
Male, age 74, both hemispheres
335.1
2161
Male, age 80, both hemispheres
330.0
2456
Female, age 91, both hemispheres
296.4
2359
Male, age 61, both hemispheres
258.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
388.7
Pig sample
Sample description
nTPM
Pons nTPM: 388.7
Samples: 4
Max nTPM: 476.1
Min nTPM: 309.0
Sample A
Female
369.6
Sample B
Female
309.0
Sample C
Male
476.1
Sample D
Male
400.0
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
