HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:252.1 nTPM
HPA Brain:359.6 nTPM
GTEx:252.1 nTPM
FANTOM5:562.0 Scaled Tags Per Million
Pig:334.4 nTPM
Mouse:840.6 nTPM
Allen mouse:27.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035738Antibody HPA035739
Glial cells LowNot detected
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 359.6
Sample id Sample description nTPM
Hippocampus
nTPM: 273.6
1898 Male, age 80, left hemisphere 385.7
1855 Male, age 76, left hemisphere 280.8
1911 Female, age 85, right hemisphere 257.7
2529 Female, age 94, left hemisphere 251.6
2621 Female, age 67, right hemisphere 250.7
2148 Female, age 91, left hemisphere 214.8
Dentate gyrus
nTPM: 269.4
1927 Female, age 91, both hemispheres 316.9
2010 Male, age 76, both hemispheres 316.1
2528 Male, age 74, both hemispheres 267.7
2530 Female, age 94, left hemisphere 267.3
2246 Female, age 85, both hemispheres 255.1
2531 Female, age 67, both hemispheres 193.1
Entorhinal gyrus
nTPM: 269.2
1938 Female, age 85, left hemisphere 336.2
2764 Male, age 80, right hemisphere 301.5
1787 Male, age 76, left hemisphere 273.7
2117 Female, age 91, right hemisphere 258.4
2686 Male, age 75, right hemisphere 231.0
2613 Female, age 94, left hemisphere 214.2
Hippocampus, CA1
nTPM: 303.4
2749 Male, age 80, left hemisphere 432.7
1873 Female, age 85, both hemispheres 311.2
2045 Male, age 76, both hemispheres 269.4
2527 Male, age 74, both hemispheres 263.7
2082 Female, age 91, right hemisphere 239.7
Hippocampus, CA2
nTPM: 293.9
1892 Male, age 76, both hemispheres 386.0
1963 Male, age 80, left hemisphere 326.0
2249 Male, age 74, both hemispheres 302.0
1940 Female, age 85, left hemisphere 269.6
2113 Female, age 91, right hemisphere 240.7
2437 Female, age 94, left hemisphere 239.2
Hippocampus, CA3
nTPM: 268.2
2137 Male, age 80, left hemisphere 375.8
1867 Male, age 76, both hemispheres 327.4
1891 Female, age 85, both hemispheres 285.1
2436 Male, age 74, both hemispheres 257.8
2620 Female, age 94, left hemisphere 190.7
2861 Female, age 67, both hemispheres 172.7
Parahippocampal cortex
nTPM: 277.4
1850 Male, age 80, both hemispheres 413.2
1990 Female, age 91, right hemisphere 306.0
1933 Female, age 85, both hemispheres 305.6
2250 Female, age 67, right hemisphere 281.2
2018 Male, age 76, both hemispheres 280.3
2693 Female, age 94, both hemispheres 272.4
2245 Female, age 91, both hemispheres 259.8
2532 Female, age 72, left hemisphere 258.3
2692 Male, age 74, both hemispheres 218.0
2622 Female, age 67, right hemisphere 179.4
Perirhinal gyrus
nTPM: 359.6
1841 Female, age 85, right hemisphere 398.9
1794 Male, age 80, right hemisphere 383.7
1847 Female, age 91, left hemisphere 379.0
2848 Male, age 76, right hemisphere 332.3
2521 Female, age 94, right hemisphere 304.2
Subiculum
nTPM: 264.2
1901 Male, age 80, both hemispheres 317.9
1977 Female, age 85, both hemispheres 311.0
2042 Male, age 76, both hemispheres 260.3
2438 Female, age 94, left hemisphere 256.9
2729 Female, age 91, right hemisphere 230.5
2619 Male, age 74, both hemispheres 208.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 252.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 252.1
Samples: 197

Max nTPM: 649.5
Min nTPM: 119.8
Std nTPM: 63.7
Median nTPM: 244.2
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 649.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 444.8
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 433.3
GTEX-11UD1-0011-R1b-SM-5BC7D 40-49 years, female 428.8
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 407.5
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 404.1
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 389.4
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 382.9
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 381.3
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 374.1
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 368.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 562.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 562.0
FF:10169-103B7 60 years, female 640.8
FF:10153-102I9 76 years, female 483.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 334.4
Pig sample Sample description nTPM
Subiculum
nTPM: 272.3
Samples: 4

Max nTPM: 326.1
Min nTPM: 238.8
Sample A Female 326.1
Sample B Female 256.3
Sample C Male 238.8
Sample D Male 268.1
Dorsal hippocampus
nTPM: 334.4
Samples: 4

Max nTPM: 440.8
Min nTPM: 237.5
Sample A Female 440.8
Sample B Female 339.2
Sample C Male 320.2
Sample D Male 237.5
Entorhinal cortex
nTPM: 271.1
Samples: 4

Max nTPM: 349.4
Min nTPM: 211.6
Sample A Female 255.7
Sample B Female 349.4
Sample C Male 267.5
Sample D Male 211.6
Ventral hippocampus
nTPM: 279.5
Samples: 4

Max nTPM: 354.7
Min nTPM: 227.2
Sample A Female 354.7
Sample B Female 227.2
Sample C Male 258.6
Sample D Male 277.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 840.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 834.3
Samples: 4

Max nTPM: 903.1
Min nTPM: 775.0
Sample A Male 775.0
Sample B Male 856.2
Sample C Female 803.0
Sample D Female 903.1
Hippocampal formation
nTPM: 840.6
Samples: 4

Max nTPM: 892.4
Min nTPM: 753.1
Sample A Male 876.7
Sample B Male 840.3
Sample C Female 892.4
Sample D Female 753.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 27.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 27.6
67752306 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 28.1
77620375 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 27.2
68196968 Antisense, RP_040922_01_D04, Mouse strain C57BL/6J (56 days, male) 26.4
77413696 Antisense, RP_070205_01_D08, Mouse strain C57BL/6J (56 days, male) 26.2

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