HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:315.7 nTPM
HPA Brain:174.5 nTPM
GTEx:315.7 nTPM
FANTOM5:143.8 Scaled Tags Per Million
Pig:270.2 nTPM
Mouse:517.1 nTPM
Allen mouse:12.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 174.5
Sample id Sample description nTPM
Hippocampus
nTPM: 145.5
1898 Male, age 80, left hemisphere 231.4
2529 Female, age 94, left hemisphere 164.4
1911 Female, age 85, right hemisphere 128.0
1855 Male, age 76, left hemisphere 124.6
2621 Female, age 67, right hemisphere 123.4
2148 Female, age 91, left hemisphere 101.6
Dentate gyrus
nTPM: 138.3
2010 Male, age 76, both hemispheres 179.3
1927 Female, age 91, both hemispheres 173.3
2530 Female, age 94, left hemisphere 142.2
2246 Female, age 85, both hemispheres 126.9
2528 Male, age 74, both hemispheres 117.0
2531 Female, age 67, both hemispheres 91.2
Entorhinal gyrus
nTPM: 128.3
1938 Female, age 85, left hemisphere 156.7
2764 Male, age 80, right hemisphere 147.8
1787 Male, age 76, left hemisphere 139.8
2117 Female, age 91, right hemisphere 119.1
2686 Male, age 75, right hemisphere 104.2
2613 Female, age 94, left hemisphere 102.2
Hippocampus, CA1
nTPM: 164.5
2749 Male, age 80, left hemisphere 268.1
1873 Female, age 85, both hemispheres 158.7
2527 Male, age 74, both hemispheres 153.2
2045 Male, age 76, both hemispheres 131.2
2082 Female, age 91, right hemisphere 111.3
Hippocampus, CA2
nTPM: 166.8
1892 Male, age 76, both hemispheres 226.3
1963 Male, age 80, left hemisphere 208.6
2249 Male, age 74, both hemispheres 187.2
2437 Female, age 94, left hemisphere 149.8
1940 Female, age 85, left hemisphere 122.4
2113 Female, age 91, right hemisphere 106.5
Hippocampus, CA3
nTPM: 143.6
1867 Male, age 76, both hemispheres 198.3
2436 Male, age 74, both hemispheres 167.9
2137 Male, age 80, left hemisphere 164.9
1891 Female, age 85, both hemispheres 158.6
2620 Female, age 94, left hemisphere 85.9
2861 Female, age 67, both hemispheres 85.8
Parahippocampal cortex
nTPM: 133.3
1850 Male, age 80, both hemispheres 185.9
2250 Female, age 67, right hemisphere 176.1
1990 Female, age 91, right hemisphere 157.7
1933 Female, age 85, both hemispheres 153.8
2018 Male, age 76, both hemispheres 147.6
2245 Female, age 91, both hemispheres 130.1
2693 Female, age 94, both hemispheres 116.8
2532 Female, age 72, left hemisphere 95.6
2692 Male, age 74, both hemispheres 92.3
2622 Female, age 67, right hemisphere 77.4
Perirhinal gyrus
nTPM: 174.5
1847 Female, age 91, left hemisphere 221.4
1794 Male, age 80, right hemisphere 193.8
1841 Female, age 85, right hemisphere 183.8
2521 Female, age 94, right hemisphere 150.5
2848 Male, age 76, right hemisphere 122.9
Subiculum
nTPM: 130.3
1901 Male, age 80, both hemispheres 173.8
1977 Female, age 85, both hemispheres 156.2
2042 Male, age 76, both hemispheres 121.5
2438 Female, age 94, left hemisphere 121.5
2619 Male, age 74, both hemispheres 107.6
2729 Female, age 91, right hemisphere 101.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 315.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 315.7
Samples: 197

Max nTPM: 855.4
Min nTPM: 141.0
Std nTPM: 112.7
Median nTPM: 300.4
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 855.4
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 712.5
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 705.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 646.8
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 637.6
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 598.8
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 564.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 561.0
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 554.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 538.3
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 535.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 143.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 143.8
FF:10169-103B7 60 years, female 177.5
FF:10153-102I9 76 years, female 110.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 270.2
Pig sample Sample description nTPM
Subiculum
nTPM: 198.1
Samples: 4

Max nTPM: 265.0
Min nTPM: 152.9
Sample A Female 265.0
Sample B Female 170.9
Sample C Male 152.9
Sample D Male 203.4
Dorsal hippocampus
nTPM: 268.3
Samples: 4

Max nTPM: 339.5
Min nTPM: 199.1
Sample A Female 339.5
Sample B Female 235.4
Sample C Male 299.1
Sample D Male 199.1
Entorhinal cortex
nTPM: 270.3
Samples: 4

Max nTPM: 410.6
Min nTPM: 192.1
Sample A Female 204.9
Sample B Female 410.6
Sample C Male 273.4
Sample D Male 192.1
Ventral hippocampus
nTPM: 211.5
Samples: 4

Max nTPM: 230.6
Min nTPM: 186.5
Sample A Female 227.1
Sample B Female 186.5
Sample C Male 201.6
Sample D Male 230.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 517.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 513.6
Samples: 4

Max nTPM: 559.8
Min nTPM: 476.4
Sample A Male 476.4
Sample B Male 523.9
Sample C Female 559.8
Sample D Female 494.3
Hippocampal formation
nTPM: 517.2
Samples: 4

Max nTPM: 600.0
Min nTPM: 473.2
Sample A Male 600.0
Sample B Male 473.2
Sample C Female 522.0
Sample D Female 473.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.8
68301443 Antisense, RP_041130_01_C06, Mouse strain C57BL/6J (56 days, male) 12.8

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