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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
176.8
nTPM
FANTOM5:
155.6
Scaled Tags Per Million
Pig:
326.2
nTPM
Allen mouse:
6.1
Expression energy
PONS - Annotated protein expression
Pending normal tissue analysis
PONS - HPA Brain RNA-seq
Max nTPM
176.8
Sample id
Sample description
nTPM
Anterior cochlear nucleus, ventral nTPM: 130.9
2188
Female, age 91, both hemispheres
142.6
1984
Male, age 76, both hemispheres
138.6
2090
Male, age 80, both hemispheres
135.4
2301
Female, age 85, both hemispheres
107.1
Dorsal cochlear nucleus nTPM: 151.5
2802
Male, age 74, right hemisphere
198.4
2187
Female, age 91, both hemispheres
196.5
2370
Male, age 61, both hemispheres
133.7
2378
Male, age 80, both hemispheres
117.5
2058
Male, age 76, both hemispheres
111.3
Dorsal tegmental nucleus nTPM: 145.6
2326
Male, age 74, both hemispheres
178.3
2083
Male, age 80, both hemispheres
171.5
1936
Male, age 76, left hemisphere
131.8
2358
Male, age 61, both hemispheres
100.8
Dorsolateral tegmental area nTPM: 164.7
2751
Female, age 85, both hemispheres
240.5
2654
Male, age 80, both hemispheres
174.7
2360
Male, age 74, both hemispheres
154.2
2337
Male, age 61, both hemispheres
132.7
2141
Male, age 76, both hemispheres
121.6
Kolliker-Fuse nucleus nTPM: 137.4
2163
Male, age 80, both hemispheres
151.0
2315
Male, age 76, right hemisphere
136.3
2793
Female, age 91, left hemisphere
125.0
Lateral lemniscal nuclei nTPM: 141.4
2036
Male, age 80, both hemispheres
162.3
2169
Male, age 76, both hemispheres
160.7
2746
Female, age 85, left hemisphere
143.7
2453
Male, age 74, right hemisphere
135.5
2320
Female, age 91, left hemisphere
104.9
Lateral parabrachial nucleus nTPM: 137.2
2013
Male, age 80, both hemispheres
166.1
2139
Female, age 85, right hemisphere
150.6
2790
Male, age 61, both hemispheres
118.5
2792
Male, age 76, both hemispheres
113.5
Lateral vestibular nucleus nTPM: 121.1
2184
Male, age 76, both hemispheres
124.2
2311
Male, age 80, both hemispheres
118.0
Locus coeruleus nTPM: 146.3
2123
Female, age 91, both hemispheres
197.9
2014
Male, age 55, unknown
162.0
2720
Male, age 74, both hemispheres
151.7
2788
Male, age 74, unknown
147.0
1980
Male, age 76, both hemispheres
129.0
2317
Female, age 72, unknown
128.0
2162
Male, age 80, both hemispheres
108.5
Medial parabrachial nucleus nTPM: 167.3
2170
Female, age 91, both hemispheres
266.0
2463
Female, age 85, right hemisphere
172.9
2854
Male, age 80, both hemispheres
157.8
2786
Male, age 76, both hemispheres
123.9
2156
Male, age 61, both hemispheres
115.9
Medial periolivary nuclei nTPM: 136.3
2791
Male, age 74, right hemisphere
172.3
2063
Male, age 76, both hemispheres
167.3
2171
Female, age 85, both hemispheres
135.9
2081
Male, age 80, both hemispheres
110.3
2458
Female, age 91, both hemispheres
95.8
Motor facial nucleus nTPM: 132.9
2365
Male, age 74, right hemisphere
176.4
2062
Male, age 76, both hemispheres
164.9
2126
Male, age 61, both hemispheres
138.2
2795
Female, age 91, both hemispheres
131.0
2697
Female, age 85, both hemispheres
99.2
2327
Male, age 80, both hemispheres
87.6
Motor trigeminal nucleus nTPM: 119.9
2560
Male, age 74, both hemispheres
138.9
2335
Male, age 61, both hemispheres
130.0
2309
Male, age 76, both hemispheres
125.1
2079
Male, age 80, both hemispheres
105.7
2321
Female, age 91, both hemispheres
100.0
Nuclei of the trapezoid body nTPM: 141.3
1983
Male, age 76, both hemispheres
180.5
2159
Male, age 61, both hemispheres
177.4
2735
Female, age 85, both hemispheres
139.1
2166
Male, age 80, both hemispheres
114.4
2368
Female, age 91, both hemispheres
95.3
Nucleus raphe magnus nTPM: 138.1
2160
Male, age 61, both hemispheres
195.3
2455
Male, age 74, both hemispheres
152.3
2051
Male, age 76, both hemispheres
142.5
2172
Female, age 85, both hemispheres
124.4
2328
Male, age 80, both hemispheres
108.2
2459
Female, age 91, both hemispheres
105.9
Paramedian reticular nucleus nTPM: 171.6
2050
Female, age 85, both hemispheres
215.6
2052
Male, age 76, both hemispheres
164.7
2057
Male, age 80, both hemispheres
154.9
2313
Male, age 61, both hemispheres
151.1
Pedunculopontine tegmental nucleus nTPM: 158.1
1921
Female, age 85, both hemispheres
163.0
2338
Male, age 61, both hemispheres
159.0
2334
Male, age 80, both hemispheres
152.3
Pontine nuclei nTPM: 176.8
1863
Male, age 55, unknown
245.5
2454
Male, age 74, left hemisphere
211.8
2727
Male, age 61, right hemisphere
200.6
2109
Female, age 72, unknown
188.1
2787
Female, age 85, both hemispheres
170.3
1968
Male, age 76, left hemisphere
155.0
2319
Female, age 91, both hemispheres
141.4
2115
Male, age 80, left hemisphere
101.5
Pontine raphe nucleus nTPM: 152.1
2122
Female, age 85, midline
167.3
2853
Male, age 76, midline
136.9
Posteroventral cochlear nucleus nTPM: 149.3
2341
Male, age 80, both hemispheres
172.5
2752
Female, age 85, both hemispheres
169.4
2070
Male, age 76, both hemispheres
140.3
2135
Female, age 91, both hemispheres
137.9
2371
Male, age 61, both hemispheres
126.3
Principal sensory trigeminal nucleus nTPM: 136.4
2158
Male, age 61, both hemispheres
168.2
2008
Male, age 80, left hemisphere
135.5
2367
Female, age 91, left hemisphere
130.2
2324
Male, age 76, both hemispheres
111.9
Reticular pontine nucleus, caudal nTPM: 135.6
2559
Male, age 74, both hemispheres
185.9
2092
Male, age 76, both hemispheres
159.2
2457
Female, age 91, both hemispheres
103.8
2332
Male, age 80, right hemisphere
93.4
Reticular pontine nucleus, oral nTPM: 167.9
1939
Male, age 80, both hemispheres
193.8
2361
Male, age 74, both hemispheres
183.7
2012
Female, age 85, both hemispheres
178.8
2167
Male, age 76, both hemispheres
145.4
2366
Female, age 91, both hemispheres
138.1
Reticulotegmental nucleus nTPM: 135.0
2452
Male, age 74, both hemispheres
150.5
2322
Female, age 91, both hemispheres
139.7
2325
Male, age 76, both hemispheres
130.2
2333
Male, age 80, both hemispheres
119.8
Spinal trigeminal nucleus, oral nTPM: 132.1
2737
Female, age 85, both hemispheres
159.3
2164
Male, age 80, both hemispheres
124.9
1978
Male, age 76, both hemispheres
112.2
Subcoeruleus area nTPM: 165.2
2369
Female, age 85, left hemisphere
208.6
1958
Male, age 80, both hemispheres
173.4
2451
Male, age 74, both hemispheres
163.8
2323
Female, age 91, left hemisphere
161.4
2089
Male, age 76, left hemisphere
119.0
Superior olive nTPM: 146.3
1875
Female, age 85, both hemispheres
192.1
2364
Male, age 74, right hemisphere
176.9
2020
Male, age 76, both hemispheres
153.6
2561
Female, age 91, both hemispheres
108.4
2329
Male, age 80, right hemisphere
100.4
Ventral periolivary nuclei nTPM: 129.6
2023
Male, age 76, both hemispheres
163.0
2165
Male, age 80, both hemispheres
134.2
2130
Female, age 85, both hemispheres
112.3
2794
Female, age 91, left hemisphere
108.9
Ventrolateral tegmental area, A5 NE cell group nTPM: 134.1
2840
Female, age 85, both hemispheres
154.7
1959
Male, age 76, both hemispheres
147.0
2449
Male, age 74, both hemispheres
141.1
2359
Male, age 61, both hemispheres
132.8
2161
Male, age 80, both hemispheres
120.3
2456
Female, age 91, both hemispheres
108.9
PONS - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Average nTPM
326.2
Pig sample
Sample description
nTPM
Pons nTPM: 326.2
Samples: 4
Max nTPM: 394.6
Min nTPM: 231.0
Sample A
Female
338.4
Sample B
Female
231.0
Sample C
Male
340.7
Sample D
Male
394.6
PONS - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
The Human Protein Atlas project is funded
