HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
RNA expressioni
Consensus:45.4 nTPM
HPA Brain:78.3 nTPM
GTEx:45.4 nTPM
FANTOM5:89.2 Scaled Tags Per Million
Pig:50.1 nTPM
Mouse:29.8 nTPM
Allen mouse:1.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA010948
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 78.3
Sample id Sample description nTPM
Hippocampus
nTPM: 78.3
2529 Female, age 94, left hemisphere 97.8
2148 Female, age 91, left hemisphere 87.8
1898 Male, age 80, left hemisphere 78.8
1855 Male, age 76, left hemisphere 72.8
1911 Female, age 85, right hemisphere 72.5
2621 Female, age 67, right hemisphere 60.2
Dentate gyrus
nTPM: 67.5
2528 Male, age 74, both hemispheres 95.6
2246 Female, age 85, both hemispheres 71.5
2530 Female, age 94, left hemisphere 65.7
2010 Male, age 76, both hemispheres 63.2
2531 Female, age 67, both hemispheres 57.1
1927 Female, age 91, both hemispheres 52.2
Entorhinal gyrus
nTPM: 70.6
2117 Female, age 91, right hemisphere 103.3
1787 Male, age 76, left hemisphere 69.7
2764 Male, age 80, right hemisphere 68.4
2686 Male, age 75, right hemisphere 68.2
1938 Female, age 85, left hemisphere 63.2
2613 Female, age 94, left hemisphere 50.7
Hippocampus, CA1
nTPM: 69.9
2082 Female, age 91, right hemisphere 95.9
2527 Male, age 74, both hemispheres 92.7
1873 Female, age 85, both hemispheres 71.9
2045 Male, age 76, both hemispheres 52.7
2749 Male, age 80, left hemisphere 36.5
Hippocampus, CA2
nTPM: 68.3
2113 Female, age 91, right hemisphere 91.1
2249 Male, age 74, both hemispheres 87.9
2437 Female, age 94, left hemisphere 65.2
1940 Female, age 85, left hemisphere 63.5
1963 Male, age 80, left hemisphere 59.9
1892 Male, age 76, both hemispheres 42.1
Hippocampus, CA3
nTPM: 63.1
1891 Female, age 85, both hemispheres 72.4
2861 Female, age 67, both hemispheres 71.3
2436 Male, age 74, both hemispheres 70.1
2620 Female, age 94, left hemisphere 66.8
1867 Male, age 76, both hemispheres 51.8
2137 Male, age 80, left hemisphere 46.3
Parahippocampal cortex
nTPM: 61.4
2692 Male, age 74, both hemispheres 76.4
1933 Female, age 85, both hemispheres 70.0
2250 Female, age 67, right hemisphere 66.8
2245 Female, age 91, both hemispheres 63.0
1850 Male, age 80, both hemispheres 62.6
1990 Female, age 91, right hemisphere 62.1
2018 Male, age 76, both hemispheres 61.5
2622 Female, age 67, right hemisphere 51.8
2693 Female, age 94, both hemispheres 51.3
2532 Female, age 72, left hemisphere 48.6
Perirhinal gyrus
nTPM: 65.6
1847 Female, age 91, left hemisphere 78.0
2848 Male, age 76, right hemisphere 77.4
2521 Female, age 94, right hemisphere 60.0
1841 Female, age 85, right hemisphere 56.6
1794 Male, age 80, right hemisphere 56.1
Subiculum
nTPM: 74.7
2729 Female, age 91, right hemisphere 110.7
2619 Male, age 74, both hemispheres 82.9
1977 Female, age 85, both hemispheres 70.0
2438 Female, age 94, left hemisphere 68.1
2042 Male, age 76, both hemispheres 59.5
1901 Male, age 80, both hemispheres 56.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 45.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 45.4
Samples: 197

Max nTPM: 124.0
Min nTPM: 18.5
Std nTPM: 16.0
Median nTPM: 42.7
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 124.0
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 102.7
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 92.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 84.5
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 79.4
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 78.9
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 78.6
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 77.9
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 74.9
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 74.4
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 73.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 89.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 89.2
FF:10153-102I9 76 years, female 113.0
FF:10169-103B7 60 years, female 65.4

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 50.1
Pig sample Sample description nTPM
Subiculum
nTPM: 50.1
Samples: 4

Max nTPM: 53.4
Min nTPM: 47.1
Sample A Female 53.4
Sample B Female 47.1
Sample C Male 51.7
Sample D Male 48.2
Dorsal hippocampus
nTPM: 25.6
Samples: 4

Max nTPM: 33.3
Min nTPM: 21.1
Sample A Female 22.3
Sample B Female 25.8
Sample C Male 33.3
Sample D Male 21.1
Entorhinal cortex
nTPM: 32.8
Samples: 4

Max nTPM: 41.6
Min nTPM: 23.2
Sample A Female 40.7
Sample B Female 23.2
Sample C Male 41.6
Sample D Male 25.5
Ventral hippocampus
nTPM: 38.9
Samples: 4

Max nTPM: 64.7
Min nTPM: 21.6
Sample A Female 37.1
Sample B Female 32.1
Sample C Male 64.7
Sample D Male 21.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 29.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 29.8
Samples: 4

Max nTPM: 40.5
Min nTPM: 23.8
Sample A Male 25.7
Sample B Male 23.8
Sample C Female 29.3
Sample D Female 40.5
Hippocampal formation
nTPM: 27.2
Samples: 4

Max nTPM: 28.9
Min nTPM: 25.6
Sample A Male 26.1
Sample B Male 28.9
Sample C Female 28.0
Sample D Female 25.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.0
71608207 Antisense, RP_050927_01_B03, Mouse strain C57BL/6J (56 days, male) 1.9
654928 Antisense, RP_040922_01_B02, Mouse strain C57BL/6J (56 days, male) 0.1

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