HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:22.5 nTPM
HPA Brain:22.4 nTPM
GTEx:22.5 nTPM
FANTOM5:50.6 Scaled Tags Per Million
Pig:155.0 nTPM
Mouse:103.2 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA008196
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.4
Sample id Sample description nTPM
Hippocampus
nTPM: 19.0
1898 Male, age 80, left hemisphere 23.0
1911 Female, age 85, right hemisphere 22.3
2529 Female, age 94, left hemisphere 19.1
2621 Female, age 67, right hemisphere 17.1
1855 Male, age 76, left hemisphere 16.7
2148 Female, age 91, left hemisphere 15.8
Dentate gyrus
nTPM: 20.0
2010 Male, age 76, both hemispheres 26.8
1927 Female, age 91, both hemispheres 21.7
2530 Female, age 94, left hemisphere 20.0
2528 Male, age 74, both hemispheres 18.7
2246 Female, age 85, both hemispheres 17.1
2531 Female, age 67, both hemispheres 15.3
Entorhinal gyrus
nTPM: 17.6
1938 Female, age 85, left hemisphere 21.7
2117 Female, age 91, right hemisphere 20.3
1787 Male, age 76, left hemisphere 18.6
2764 Male, age 80, right hemisphere 17.0
2686 Male, age 75, right hemisphere 15.2
2613 Female, age 94, left hemisphere 12.5
Hippocampus, CA1
nTPM: 22.4
2045 Male, age 76, both hemispheres 28.4
2749 Male, age 80, left hemisphere 25.0
2082 Female, age 91, right hemisphere 20.3
1873 Female, age 85, both hemispheres 20.0
2527 Male, age 74, both hemispheres 18.3
Hippocampus, CA2
nTPM: 21.8
1892 Male, age 76, both hemispheres 31.6
2249 Male, age 74, both hemispheres 22.4
2113 Female, age 91, right hemisphere 21.2
1940 Female, age 85, left hemisphere 20.3
1963 Male, age 80, left hemisphere 18.2
2437 Female, age 94, left hemisphere 17.1
Hippocampus, CA3
nTPM: 21.7
1867 Male, age 76, both hemispheres 34.6
2137 Male, age 80, left hemisphere 22.4
2436 Male, age 74, both hemispheres 21.7
1891 Female, age 85, both hemispheres 20.5
2620 Female, age 94, left hemisphere 15.5
2861 Female, age 67, both hemispheres 15.3
Parahippocampal cortex
nTPM: 18.9
2250 Female, age 67, right hemisphere 25.6
2018 Male, age 76, both hemispheres 21.9
1933 Female, age 85, both hemispheres 21.1
1990 Female, age 91, right hemisphere 19.6
2693 Female, age 94, both hemispheres 19.5
2692 Male, age 74, both hemispheres 18.4
1850 Male, age 80, both hemispheres 17.2
2245 Female, age 91, both hemispheres 17.2
2622 Female, age 67, right hemisphere 14.6
2532 Female, age 72, left hemisphere 14.3
Perirhinal gyrus
nTPM: 19.1
1841 Female, age 85, right hemisphere 21.4
1847 Female, age 91, left hemisphere 19.5
2848 Male, age 76, right hemisphere 19.4
2521 Female, age 94, right hemisphere 18.7
1794 Male, age 80, right hemisphere 16.6
Subiculum
nTPM: 20.5
2042 Male, age 76, both hemispheres 32.8
2729 Female, age 91, right hemisphere 20.7
1901 Male, age 80, both hemispheres 20.5
1977 Female, age 85, both hemispheres 19.2
2619 Male, age 74, both hemispheres 16.5
2438 Female, age 94, left hemisphere 13.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 22.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 22.5
Samples: 197

Max nTPM: 58.0
Min nTPM: 10.5
Std nTPM: 6.5
Median nTPM: 21.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 58.0
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 45.1
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 43.7
GTEX-1GN73-0011-R1a-SM-CKZNT 60-69 years, male 43.6
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 43.0
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 42.3
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 39.1
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 36.6
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 35.2
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 34.9
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 34.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 50.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 50.6
FF:10153-102I9 76 years, female 60.7
FF:10169-103B7 60 years, female 40.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 155.0
Pig sample Sample description nTPM
Subiculum
nTPM: 129.3
Samples: 4

Max nTPM: 157.6
Min nTPM: 115.4
Sample A Female 157.6
Sample B Female 118.5
Sample C Male 115.4
Sample D Male 125.5
Dorsal hippocampus
nTPM: 155.0
Samples: 4

Max nTPM: 209.2
Min nTPM: 112.2
Sample A Female 209.2
Sample B Female 138.1
Sample C Male 160.3
Sample D Male 112.2
Entorhinal cortex
nTPM: 152.7
Samples: 4

Max nTPM: 218.5
Min nTPM: 110.8
Sample A Female 137.9
Sample B Female 218.5
Sample C Male 143.4
Sample D Male 110.8
Ventral hippocampus
nTPM: 126.4
Samples: 4

Max nTPM: 140.4
Min nTPM: 115.2
Sample A Female 140.4
Sample B Female 115.2
Sample C Male 125.5
Sample D Male 124.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 103.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 103.2
Samples: 4

Max nTPM: 107.4
Min nTPM: 100.3
Sample A Male 100.3
Sample B Male 103.0
Sample C Female 107.4
Sample D Female 102.1
Hippocampal formation
nTPM: 101.4
Samples: 4

Max nTPM: 108.5
Min nTPM: 92.1
Sample A Male 108.5
Sample B Male 92.1
Sample C Female 107.7
Sample D Female 97.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
74800903 Antisense, RP_060315_02_A04, Mouse strain C57BL/6J (56 days, male) 3.0
386004 Antisense, RP_040625_01_H03, Mouse strain C57BL/6J (56 days, male) 1.3

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