HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
RNA expressioni
Consensus:140.3 nTPM
HPA Brain:134.1 nTPM
GTEx:140.3 nTPM
FANTOM5:430.0 Scaled Tags Per Million
Pig:138.0 nTPM
Mouse:27.1 nTPM
Allen mouse:19.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA023981Antibody CAB004210
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 134.1
Sample id Sample description nTPM
Hippocampus
nTPM: 132.1
2621 Female, age 67, right hemisphere 154.3
2529 Female, age 94, left hemisphere 146.9
1898 Male, age 80, left hemisphere 127.3
1855 Male, age 76, left hemisphere 126.8
2148 Female, age 91, left hemisphere 122.6
1911 Female, age 85, right hemisphere 114.6
Dentate gyrus
nTPM: 134.1
2530 Female, age 94, left hemisphere 197.5
2531 Female, age 67, both hemispheres 145.6
2246 Female, age 85, both hemispheres 134.6
2010 Male, age 76, both hemispheres 120.4
2528 Male, age 74, both hemispheres 108.0
1927 Female, age 91, both hemispheres 98.4
Entorhinal gyrus
nTPM: 132.8
2686 Male, age 75, right hemisphere 146.3
2117 Female, age 91, right hemisphere 142.2
1938 Female, age 85, left hemisphere 133.2
2764 Male, age 80, right hemisphere 129.9
2613 Female, age 94, left hemisphere 126.4
1787 Male, age 76, left hemisphere 118.7
Hippocampus, CA1
nTPM: 119.4
2749 Male, age 80, left hemisphere 139.5
2527 Male, age 74, both hemispheres 132.7
1873 Female, age 85, both hemispheres 119.8
2045 Male, age 76, both hemispheres 103.4
2082 Female, age 91, right hemisphere 101.5
Hippocampus, CA2
nTPM: 121.1
1892 Male, age 76, both hemispheres 139.8
2437 Female, age 94, left hemisphere 133.1
1963 Male, age 80, left hemisphere 120.0
1940 Female, age 85, left hemisphere 114.7
2113 Female, age 91, right hemisphere 113.1
2249 Male, age 74, both hemispheres 105.8
Hippocampus, CA3
nTPM: 112.0
1867 Male, age 76, both hemispheres 125.8
2137 Male, age 80, left hemisphere 124.1
1891 Female, age 85, both hemispheres 122.0
2861 Female, age 67, both hemispheres 105.4
2436 Male, age 74, both hemispheres 104.6
2620 Female, age 94, left hemisphere 90.3
Parahippocampal cortex
nTPM: 127.4
2245 Female, age 91, both hemispheres 165.5
2532 Female, age 72, left hemisphere 165.4
1850 Male, age 80, both hemispheres 129.0
2692 Male, age 74, both hemispheres 126.7
1990 Female, age 91, right hemisphere 121.9
2622 Female, age 67, right hemisphere 121.4
1933 Female, age 85, both hemispheres 120.7
2250 Female, age 67, right hemisphere 117.6
2018 Male, age 76, both hemispheres 115.8
2693 Female, age 94, both hemispheres 89.8
Perirhinal gyrus
nTPM: 112.6
1841 Female, age 85, right hemisphere 118.5
2848 Male, age 76, right hemisphere 116.2
1847 Female, age 91, left hemisphere 113.5
1794 Male, age 80, right hemisphere 109.4
2521 Female, age 94, right hemisphere 105.6
Subiculum
nTPM: 133.4
2438 Female, age 94, left hemisphere 178.7
1901 Male, age 80, both hemispheres 145.1
1977 Female, age 85, both hemispheres 133.2
2042 Male, age 76, both hemispheres 126.6
2619 Male, age 74, both hemispheres 126.1
2729 Female, age 91, right hemisphere 90.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 140.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 140.3
Samples: 197

Max nTPM: 273.7
Min nTPM: 75.0
Std nTPM: 29.0
Median nTPM: 136.7
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 273.7
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 264.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 253.8
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 236.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 222.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 216.5
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 214.1
GTEX-1313W-0011-R1b-SM-5EQ4A 50-59 years, female 208.5
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 196.2
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 196.0
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 182.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 430.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 430.0
FF:10169-103B7 60 years, female 436.2
FF:10153-102I9 76 years, female 423.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 138.0
Pig sample Sample description nTPM
Subiculum
nTPM: 117.6
Samples: 4

Max nTPM: 152.0
Min nTPM: 103.8
Sample A Female 152.0
Sample B Female 105.0
Sample C Male 103.8
Sample D Male 109.7
Dorsal hippocampus
nTPM: 138.0
Samples: 4

Max nTPM: 172.2
Min nTPM: 110.4
Sample A Female 172.2
Sample B Female 122.8
Sample C Male 146.6
Sample D Male 110.4
Entorhinal cortex
nTPM: 105.6
Samples: 4

Max nTPM: 117.7
Min nTPM: 95.5
Sample A Female 109.5
Sample B Female 117.7
Sample C Male 95.5
Sample D Male 99.7
Ventral hippocampus
nTPM: 118.1
Samples: 4

Max nTPM: 138.4
Min nTPM: 92.6
Sample A Female 119.0
Sample B Female 92.6
Sample C Male 122.4
Sample D Male 138.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 27.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 27.1
Samples: 4

Max nTPM: 31.3
Min nTPM: 24.7
Sample A Male 26.9
Sample B Male 24.7
Sample C Female 25.4
Sample D Female 31.3
Hippocampal formation
nTPM: 25.6
Samples: 4

Max nTPM: 28.1
Min nTPM: 22.4
Sample A Male 24.5
Sample B Male 27.5
Sample C Female 28.1
Sample D Female 22.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.4
68442979 Antisense, RP_050111_01_B06, Mouse strain C57BL/6J (56 days, male) 19.4

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